Gene PSPTO_4713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4713 
Symbol 
ID1186396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5338911 
End bp5339549 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID637396043 
Productalanyl tRNA synthetase-related protein 
Protein accessionNP_794457 
Protein GI28871838 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.601356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTG CATTTTGGAA CACCCCTTAT CTCTCGTCCC TAGACGCCCG CGTGCTAAGT 
ATTGACGGGC GCGACGTGGT GATCAGCCCG ACGATTTTCT TCGCCGAATC CGGCGGCCAG 
GAATCGGATA AGGGTTGCAT CAACCGTATC GAAGTCACCC AGGCCACGGT TGTTGACGAG 
CGCATCATCT ATCGCCTTGC CGAAGATCCA GACTTTGCCG TGAGCGATCT GGTTAGCGTG 
GAGATCGATT GGCCTCGTCG GTATGCGCTT ATGCGTTTGC ACTTCGCCGC TGAAATTGTG 
CTGGAGTTTT TCTATAAAAA ATTCCCAGAC CTGGAAAAGA TCGGTGCCCA TATCGGCCAA 
CACAAAGCGC GGATCGACTT CTCGCTGGAG GGTAATGTCA GCCAGTACTT TCCGGAAATC 
CTGCAGGGCG TAGAGCACCT CGTAGCCGCC GGCCTACCGA TTGAAAGCCG CTTTACGGAC 
ACCAAGTGCT TGCGCCGTTG CTGGTACATC AAGGGGTTTT CAGAGGTGCC CTGTGGCGGT 
ACACATCTGC GTACCACGGG CGAGGTCGGG CGTATTCGGC TCAAGCGCAA TAACATCGGC 
GCGCACAAAG AGCGTGTCGA AATCTACCTA GTGGATTGA
 
Protein sequence
MERAFWNTPY LSSLDARVLS IDGRDVVISP TIFFAESGGQ ESDKGCINRI EVTQATVVDE 
RIIYRLAEDP DFAVSDLVSV EIDWPRRYAL MRLHFAAEIV LEFFYKKFPD LEKIGAHIGQ 
HKARIDFSLE GNVSQYFPEI LQGVEHLVAA GLPIESRFTD TKCLRRCWYI KGFSEVPCGG 
THLRTTGEVG RIRLKRNNIG AHKERVEIYL VD