| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4671 |
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| Symbol | |
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| ID | 1186354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5274267 |
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| End bp | 5275259 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637396008 |
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| Product | alkaline D-peptidase, putative |
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| Protein accession | NP_794422 |
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| Protein GI | 28871803 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTCT TTGAGTCAAA ACACCAGAAT CCTGGTTTTA TCTCATTACT CTGTTTTGAT
CAGGGCGGGT GCCATGAGCG CAGTGTTGGC GTGGAAAGCA TCGCAACCCA ACAGCCGCTG
AGCCGCGATA CTATTTTCGA TCTGGCTTCG GTTTCAAAGC AGTTCACTGC GTTTTGTTTG
CTGCTGCTGG AGCAAGATGG ACGTTTATCT CTGAGTGACC CGGTCAGCCG CTTTGTACCA
GAAGTAAGCG GCTATTCAGG CCAGGTTACT TTGCAGGATC TGGTCTATCA TGTTGGCGGA
ATGCCCGACT TCATAGACAT CGCGTTGTCG CATGGTATCA ACTTTGAAGA CACACTCAGT
GCCGCCGGGG TACTTGATAA GTTGAGGGGG CAGACCAGGG CTGACTTTCC GGCGGGCACT
CGTTTCGAGT ACAGTAATAC AGGTTATTTT CTATTGGGGA CAGTTATAGA GCGCGTGAGT
GGAGTCCGCT ATGCCGACTA TGCCAGAGCC CGCATTTTTA CACCCCTCAG TATGCGGGAC
ACCTTCATTT TAGACGGCAT GAGCCAAGAC AAGCGGGTTG CGACTGGGTA TGCAAAGGGC
AGCGGCGGAG TTTATACCGC CTCACGAAAC CCTTGGAATT CCCTTGGCGC GAGTCTGGTG
CATTCATCCG CGGCAGACCT CATGAAGTGG GGCGAAAATT TTCTCACCGC TAAAGTAGGC
GGGCATGCAG CCATACAAAA AATGCTAACG CCACTCGCTC GAATAAATGA GCGGGGAGAA
GCGATAGCTG AGCATTCTGC TTATTGTTTT GGACTGTCAA TGGACGAAGA CGGCGAAGGC
GTGAAGTTCT GTCATGAGGG CGGCACGGCG GGTTTCAGTA GCTATTTCGT GCGTTCACTG
CAAAAGGGCT ATACCTTGGC TGTTTTATCA AACATTGAAG ATTATGACGT AGAGCAACTG
GCCGATGACT TATGTGCGGA GTATGGTCTG TAA
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| Protein sequence | MPLFESKHQN PGFISLLCFD QGGCHERSVG VESIATQQPL SRDTIFDLAS VSKQFTAFCL
LLLEQDGRLS LSDPVSRFVP EVSGYSGQVT LQDLVYHVGG MPDFIDIALS HGINFEDTLS
AAGVLDKLRG QTRADFPAGT RFEYSNTGYF LLGTVIERVS GVRYADYARA RIFTPLSMRD
TFILDGMSQD KRVATGYAKG SGGVYTASRN PWNSLGASLV HSSAADLMKW GENFLTAKVG
GHAAIQKMLT PLARINERGE AIAEHSAYCF GLSMDEDGEG VKFCHEGGTA GFSSYFVRSL
QKGYTLAVLS NIEDYDVEQL ADDLCAEYGL
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