| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4517 |
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| Symbol | |
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| ID | 1186200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5087432 |
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| End bp | 5088382 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637395858 |
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| Product | fatty acid desaturase, putative |
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| Protein accession | NP_794270 |
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| Protein GI | 28871651 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.61204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCAAA GCAAAGTATT CAAGTATTCC CGCTGGGACA TTGCATGCTG TCTGGTAATT
CCTTTTCAGA TCAGCGTGTA CGCTTTACTC GCCTACTACT ATCAAAGCAT GTCGCTGCTT
GCCCTGCTCG GCATGATCCC CGTTCTGTTT GCCTTGTCCC TGCAAAACGC CGGGGCCAAC
CATAACCATT ACCACACGCC CTTCTTTCGT ATCCGGTGGA TGAATACACT GACGCGAATG
GGCTTTTCTG CGACGGAAGC GCCCAAGACG CCCTATAACA TCGGCCACGG CATTCATCAC
GCAACGCACC AGTCATGGAA TGACAAATCA ATCCTGGCCG TTCTCGGACT GAAGCGTTCA
ATCGCCCAAC AACTGATCAG CTTCGGTCTG TTCATTTTCG AATCGTTGGG CGTGAAGTAC
TTCACCTTGC TGGTCCTGCT GAAATACTGG CCCATCGAGC GCGTGGCGGT GCTGGCATCA
CCGGAAGATC CTGTGCTGGC AGCCCGGGCG CTGAAGAAAC TGCTGGAACC TGCAAAACTG
AAGGCGGCGA AATACGACCT GGCAGCCTGG TTCCTGTTTC GCCTCGTACT GTGTGTGGTT
GACTGGCAGT TTTTCTTCTT TTACTTCATT CCCGTCACCT ACCTCATCGA TACCCTGAGG
CAAGGCGAGA ACTACTTTCA GCACTGGGGA GCAACGGACC CCAATGACCC GAAGCGCGAT
TCGGTGAGTT GCTACTCAAC GCTCTACAAC CTGCTGACGT TCAATCTGGG CTATCACCAG
GAACATCACT ACAAGCCCGG CCTGCATTGG CTAAAACTTC CGGAGCTCAC CAAAGAGTTA
CCCAGCGACC GCCATACCGT GCCGTATTCG CATTACTTGA ATTCGCCGTT GATGTTTCCA
GAACGTGCAA GCCAACTGAG GAAGGAGAAC GTGGCAGACG TATCACCCTG A
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| Protein sequence | MLQSKVFKYS RWDIACCLVI PFQISVYALL AYYYQSMSLL ALLGMIPVLF ALSLQNAGAN
HNHYHTPFFR IRWMNTLTRM GFSATEAPKT PYNIGHGIHH ATHQSWNDKS ILAVLGLKRS
IAQQLISFGL FIFESLGVKY FTLLVLLKYW PIERVAVLAS PEDPVLAARA LKKLLEPAKL
KAAKYDLAAW FLFRLVLCVV DWQFFFFYFI PVTYLIDTLR QGENYFQHWG ATDPNDPKRD
SVSCYSTLYN LLTFNLGYHQ EHHYKPGLHW LKLPELTKEL PSDRHTVPYS HYLNSPLMFP
ERASQLRKEN VADVSP
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