Gene PSPTO_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4484 
Symbol 
ID1186165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5050151 
End bp5050504 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID637395824 
Producthypothetical protein 
Protein accessionNP_794238 
Protein GI28871619 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TCGCTATCGC TGCTGCTACC GCTACTGCCC TGACTCTGAC CATGGCTAAC 
GCTGCATTCG CTCAGACTTC GGCCCAAGCG CCAATGGTTC TGGCAGCTAA CACCACCACT
CAAGAAGTCA AAGAAGATAC CTCTGACACC TGGATCACCA CCAAAGTCAA AGCTGACCTG
CTGACTGAAA AAGGCATCCC GGGTTCGGAC ATCAAGGTTG AAACCAACAA AGGCGTGGTT
TCCCTGTCTT CGACCGTAGC TGTAACTGAT GCTCAGAAGA AAATCGCTGT AGCAATCACC
AAGAAAATCA AAGGCGTCAA AGACGTATCG GCTGCTGGCC TGAAAGCCGA GTAA
 
Protein sequence
MKKFAIAAAT ATALTLTMAN AAFAQTSAQA PMVLAANTTT QEVKEDTSDT WITTKVKADL 
LTEKGIPGSD IKVETNKGVV SLSSTVAVTD AQKKIAVAIT KKIKGVKDVS AAGLKAE