Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4484 |
Symbol | |
ID | 1186165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5050151 |
End bp | 5050504 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637395824 |
Product | hypothetical protein |
Protein accession | NP_794238 |
Protein GI | 28871619 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT TCGCTATCGC TGCTGCTACC GCTACTGCCC TGACTCTGAC CATGGCTAAC GCTGCATTCG CTCAGACTTC GGCCCAAGCG CCAATGGTTC TGGCAGCTAA CACCACCACT CAAGAAGTCA AAGAAGATAC CTCTGACACC TGGATCACCA CCAAAGTCAA AGCTGACCTG CTGACTGAAA AAGGCATCCC GGGTTCGGAC ATCAAGGTTG AAACCAACAA AGGCGTGGTT TCCCTGTCTT CGACCGTAGC TGTAACTGAT GCTCAGAAGA AAATCGCTGT AGCAATCACC AAGAAAATCA AAGGCGTCAA AGACGTATCG GCTGCTGGCC TGAAAGCCGA GTAA
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Protein sequence | MKKFAIAAAT ATALTLTMAN AAFAQTSAQA PMVLAANTTT QEVKEDTSDT WITTKVKADL LTEKGIPGSD IKVETNKGVV SLSSTVAVTD AQKKIAVAIT KKIKGVKDVS AAGLKAE
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