| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4395 |
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| Symbol | |
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| ID | 1186076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4958927 |
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| End bp | 4960963 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395735 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_794149 |
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| Protein GI | 28871530 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.54023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTGC GCCAACGCCT GGAAAACCTG CCGGTAGGTC AGAAACTGCT GGCTGCCCTG
CTGGTCCTGA TGACCACCGT GCTGCTGGTC GCCAACCTGA CCTTCATCGG TGCCGCGTAT
TACATCTCTC AAGAAGCGAT GGCGCCACAG GCCTTGCAGA CCATCGGCCG ACTGATCAGC
AGCGCCGACC TCAACGAGCG GGCCTTGTAC TCGCCAAACG AAGCACGTGC CCTGCTCAAA
GAGCTGAAAA GTTACGGGCC GTTACGTGCA GCGGCGCTGT ATGACAATGA CGGCGAGCGG
CTTGAACAGA TGCAACAGGG TCAGAGCCTT GAACTGCCCA GGCACTTCAA AGACCTCGAT
AGCTGGCGCC TGACCGAGTT TCGCAGCACG CAGGTGATCA CCGTGCCCAA GGGAGACGAG
CCGCCCGGGC ATCTGTTGCT GGTCGCCAGC AGCGAGCTGC CGCCTGCGTT CTATACCGGC
ACGCTGACCG CCAGCCTTGG CATTCTGGTG TTCAGCGTGT TGCTGTGGCT GGTGGTGGCG
CGGCAGATCA GGCGCTTGAT CACCGAGCCT ATCTACCAAC TCGAAGAACT GTCCCGGCAG
GTGACCCGCG AAGAAAACTA CGCCTTGCGC GCGGAGCCTG GCAACGTCGA TGAAATCGGC
AGTCTGGCCG AGGCGTTCAA TACCATGTTG TCGCGTATCG AGGCGCGTGA GCAGCAACTC
AAGCGCGCCC GTGACGATTC CCAGGAAGCC TACGATCAGG CTCAGGGGCT GGCCGAGGAA
ACCCGCCACA CCAACCGCAA GCTGGAGCTG GAAGTTCAGG TGCGCAGCAA GATCGAGAAG
AAGCTCACCG GTTTTCAGAA CTACCTCAAC AGCATCATCG ATTCGATGCC TTCGGCGATG
ATCGCGCTGG ATGAGCAGTT GTACGTGACC CAGTGGAATC AGGAGGCGAC CGCGCTTTCC
GGGACCACGC TGGACGAGGC GCTGAATCAG CCGATTTTTC TCGCATTCGA GCCGATGCGT
TCGTTTCTGC CGCAGATCAA GCATACGGTC GAGCGGCACA GCGTGACCAA GATCGAGCGT
GTGAACTGGA TCAAGAACGA CGAGGCGCGC CACTATGCGC TGACCTTTTA CCCGCTGACC
GGCGATGCCG GGCGGGGCGT GGTGATCCGC ATCGATGACA TCACCCAGCG TATTTCGCTG
GAAGAAATGA TGGTCCAGTC GGAGAAGATG CTGTCAGTCG GCGGGCTGGC GGCGGGCATG
GCGCATGAGA TCAACAACCC GCTGGGGGCG ATTTTGCACA ACGTGCAAAA CATCCGACGG
CGCCTGTCTC CGGAATTGCC AAAGAACATC GAACAGGCCG AGGCCGATGG CATCGATCTG
GCACAGGTCA ATCTTTACCT GGAAAGCCGC GACGTGCCAA AGCTGCTCGA CGGCATTCAG
CAGGCCGGTG CAAGAGCCGC GAAAATCGTC AGCCACATGC TCAACTTCAG TCGCTTGAGC
AGCCGTCAGC TGTCGCCCAG CGACTTGCCG GCACTGGTTG ATCAGGCCGT GGAGATCGCC
AGTAACGACT TCGACCTGAC CATCGGTTTC GACTTCAAGG GCCAGCACAT CATTCGTCAG
TTCGACCCGG AACTGGGTCC GGTGCCGTGC ATCGCCAACG AGCTGGAACA AGTGCTGCTG
AACTTGCTGA AAAACGCTGC CCAGGCAATT CATCAGCGAC CCGAGAGCGA AGAGCCCGGA
CGCATTATCC TGCGCACCCG TCTCAATCCA CCGTGGGCCG AAATTCAGGT GGAAGACAAC
GGCATCGGCA TGTCGGAGAG CGTTCGCAAA CGTACTTTCG AGCCGTTCTT TACCACCAAG
GAGATTGGTC AGGGCACCGG GCTGGGTCTG TCGGTGTCGT ACTTCATCAT CACCAACAAC
CACAAAGGCC AGATGGAGGT GCAGTCCTCC CTCGGCACCG GCACCTGCTT TACCCTGCGT
TTACCGCTGG TAGCCAATCA GGTGAATGTT CAGCAGCAGG TCATTTCCAA GTCTTGA
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| Protein sequence | MPLRQRLENL PVGQKLLAAL LVLMTTVLLV ANLTFIGAAY YISQEAMAPQ ALQTIGRLIS
SADLNERALY SPNEARALLK ELKSYGPLRA AALYDNDGER LEQMQQGQSL ELPRHFKDLD
SWRLTEFRST QVITVPKGDE PPGHLLLVAS SELPPAFYTG TLTASLGILV FSVLLWLVVA
RQIRRLITEP IYQLEELSRQ VTREENYALR AEPGNVDEIG SLAEAFNTML SRIEAREQQL
KRARDDSQEA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAM
IALDEQLYVT QWNQEATALS GTTLDEALNQ PIFLAFEPMR SFLPQIKHTV ERHSVTKIER
VNWIKNDEAR HYALTFYPLT GDAGRGVVIR IDDITQRISL EEMMVQSEKM LSVGGLAAGM
AHEINNPLGA ILHNVQNIRR RLSPELPKNI EQAEADGIDL AQVNLYLESR DVPKLLDGIQ
QAGARAAKIV SHMLNFSRLS SRQLSPSDLP ALVDQAVEIA SNDFDLTIGF DFKGQHIIRQ
FDPELGPVPC IANELEQVLL NLLKNAAQAI HQRPESEEPG RIILRTRLNP PWAEIQVEDN
GIGMSESVRK RTFEPFFTTK EIGQGTGLGL SVSYFIITNN HKGQMEVQSS LGTGTCFTLR
LPLVANQVNV QQQVISKS
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