| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4342 |
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| Symbol | |
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| ID | 1186023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4897445 |
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| End bp | 4902292 |
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| Gene Length | 4848 bp |
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| Protein Length | 1615 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395683 |
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| Product | insecticidal toxin protein, putative |
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| Protein accession | NP_794097 |
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| Protein GI | 28871478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA CCCTTGAAAG CCGGCTCAAC GAATCTTTTC GCGATGCGCT GGTGGCTTAC
TATCTGAGTG AGGTCGTACC CAACGACCCT ATGCTGAAGC GCCTGGGCCT GGACCAGCGC
TTGAAAACCG CCAATGACCT GTATGAGTTT TTTCTGCTCG ACAATCAGGT CAGCAATGAA
GTCCAGACCA GTTATGTCGC ATCGGCAATG AGCAGCCTGC AGCAGCTCAT CAACGGCACG
TTACTGGGCA TGGAGCCGGG CTATGAAACG CTGCTGCCGA CCGAAGCGCG CTTTGTCGAG
TGGCGTGAAC GCAGCAGTCA ATACCCGATC TGGGCGGCCA ATATGCAATT GGCACTGTAT
CCGGAAATCT ATATTTCTCC GGCATTGCGC TTGAAGAAAT CCGGCTACTT CACGCAACTG
GAAAACGACA TCAATCAGAA CAGGATCAAT GTCGACACGG CGCAAGATGC GGTAAAAGCC
TACCTGGCCA GTTTTGAAGA AGTCGCCAAC CTGACGATCA TCAACGGCTA CATCGACAGC
GACCGATTCG CAGAAGGCAA GTACTACTTT ATCGGTAAGT CGCGCGCCGA GAACATTTAT
TACTGGCGCA CGGTGGACAT GAATGAGCGT GCGTACCAGG AAGGCACTGA AGGGGCGAAG
TTCGATAATC CGACACCCGG TGCCTGGTCC GACTGGAAGC GGGCCGAGAT CGGCATCAAT
GCCAATACAC TGGAAAGAAC CATTCGCCCG GTGTATTTCA ACAATCGGTT GTTTGTGACG
TGGGTGGACC TGGTTCATGT TACCGAACAG GTAGACGTTA CGCTGCCCGC CGGTACCGTT
AAGCCAGGTG CCGATGGCAG TATCCCCATC AGTCCACCCG GCGATACAGC CCCCGTTACG
GTGATCACCC CCAATGTGCG CCTGGTGTTG AATATTTCCT ATAAAAAATA TGACGACTCC
TGGAGTGCGC CACAAATCTA CATGGACGTG ACAACACCCA ATGTCTTCAC CCGGGCAGGC
AAGGCAGTCA ACCTTGAAAA CGACCTGAAC AGTATTGCCA TCTTCGATGT GTCGGCCTCC
CCGGAATCGC TGTTTATCGC CATGTATGCG GGTGAAGCGC TGACGCCCGG TGACACTGAT
GGCTCAACGT CGACATATGC CTTTCTGCAC ACGGCCTTTA TCGACAAGAA TTTCAACAAA
ACGCCAGCTT TTCCAGTTGC GAACTATGTA GACGCCGTTT CCGACAAGGC AGACCTGGGT
CTGGAGCAAC CTCGCGTGCG CAAGACCTGC TGGGCATTTG CTTTAAAGAA CAAAGGGAAT
TTTCAGTTTA CGTGGAGCCT TTATATTCGG TTGAAGTCAT CGTTGACCAC AGCACCCAAT
GGGGGCGAGA CATGGTGGAA CTGTCTAGGC CACCAGAACA CGATTACCGA TATGACGGGG
GCGCTTCAAC CCGTTTTGAA CCTCAACGCT TCGTCCATCA CACTGTCCAC GGCGCTGAAT
AACGATATCC GCGGCGATGA TTATCTGGAG GTTTTACTGA CATTCAGGGT AGAACGTCGC
AGTTGGGCAC TTAAACTTAT TGTTGAGCCT GACTATTTGA CGACCACCTT CGCCACCTTA
AAAAGTGGAT CAACACTGTC TATATCAACT ACCGAATCAG TGGCAGGAAA GATTAACTTC
ACGCTCGTCA CTTCCGACGC TACCGATGAT AATATGTTTG ACTTCCTGCT CGATGAAAAC
TTTCAAAACT ACCGGATCAG CGGCACCGCC CAAGTAAAAA ACATCGAAAA TGGAAAATGC
AAATCCGGTG TTATCAGCGC GCTACTCTAT AATCAAGCAC ACCCTGGCTT TATAAGATCG
GGCGTCATCA TAATTGAAGC CCCCACTTGG AGCGACCGCC TGGATACTAC TGCAGAGGGG
CAGGTTCTGA GCGCCAAGGA ATATACATTC GCTCAATGGT TCAGCTACCC ACTGGATATG
AACCTCCCCC ACAACGACTC GCAAAAGCAC CTGACCGCAC GACCTCCGAC CAGCAGCATT
ACAGCACCGA GCCGTTACGA AACAACCATT ACATTCGATA AATCCACGCT TCTGCCAAAT
CTCCCGCAAA CTCAATTCAT CAGCGGCTCG AAAAAGTTCT ATATCACTCA TGGCATCGGC
GTCAACTCGG TTAATCCCGC GGTCTGGATC GGTAACGCCC TCAAATCCAC CGAAATAGAG
CTGGAGTGGG CAACCGCTGA TGGAAGCGAC CCCGTCTCCC CCAAAATCAA CAAACGCATC
AATGCCATTC TGGGGATCGC CGAATACATC GATTTCTCCG CCTCCAGCAT TCGGTTCAGC
GACAACTCGA CCACCGACAC CCGCGACCCC ATCCGCATGA ACACGCTGTT CGCCCGCGAG
CTGATCAACA AGGCCAACAT TGCGCTCGAA GCCTTGTTGT CCTGGGACAC CCAGCAATTG
CAGGAGCCGC CGATCGATGA AGACGACATC CCCGACCTGA TGGACTTCAA AGGGGCCAAC
GGTCTGTACT TCTGGGAGCT GTTTCTGCAT CTGCCGTTCA TGATCTCCCA TCGGTTGAAT
CTGGAACAGC GCTTCACCGA TGCCGAACGC TGGCTCGGGT TCATCTTCGA ACCGGGCCGT
AAAAAAACAG GCGACGCACC GGCTTACTGG AACGTTCGCC CACTGGTGGA AGTGCCGGAC
CCGGATTACT TTCTGCGCGC CCCTATCGAC CCGGACGGTA TCGCGGCGAG TGACCCGGTG
CGCTATCAGA AAGCGGTGTA TTTCCACTAC ATCAAGAACC TGATCGACCG GGGCGACATG
GCCTATCGGC AATTGACGCC CGACAGTCTG GGCGAAGCCA AGCTCTGGTA TGTGCGTATT
CTCGATCTGC TCGGGCCGCG CCCGGATGTG AAACTGACCA GCCAATGGAT GCCTATGGCA
CTGGGCGATC TGGCAGCGTC CACCAGTCCG GGGCTGCGGG CTTTCGAGCA GCAGCTTGTC
GAGCAGGAAC AACAGGTACG TATCAGCGCC GCCATCAACG ATGGCAAAGC CACTGTCAGT
TTCAGCCAAC CGTCTCTGCG CTTGAGCACC TTCGGCAGCG ACCCGACATT GAACGAGGAA
GACAGCGATC ACTTCATCCT TCCGATGAAT TCGGAGCTGG TCAAATACTG GGACATGCTT
GAGTCGCGCC TGTACAACCT GCGCCACAAC ATGACGCTGG ACGGCAAGCC ACTGTCCCTG
GCGCTGTTCG CTGCACCGCT GGACCCAAGG GCACTGCTAG CGGCCTACGC CAATGGCGCG
ACCGACAGCG GTGCAGGCAG CCTATTGGCT CAGGAAACGC CGCACTATCG CTACCCGGTC
ATGTTCGCCA GAGCCAACGC GGCGGTGGAG ACCCTGATCC AGTTCGGCTT CACCTTGCTG
TCGATCATCG AGCGCAAGGA GCAAGGGCAG TTGATGGAGC TGCAACAGCA GCAGGTCTGG
GAGTTCGCCC AGTACGCCAT TGACCTGCAG CTTGAGGCGC AAAAAGTCGA AGTTCAGGCA
CGCAAGGCAT TGGAGGCCAG CAAGGCCGTG GTTGACGCCA GGGCCAGTTT TTACGGACAG
CTGGCGGATG AAAATGTCAG TGCGGGGGAA GTCGCCGCTG GTGCTGAACA ACTCGTTGCA
CGGATTGCCG AAGGCGTCGC CCACTCGGTA AGCGCCGTGG CTTCCGGCTT GAAAGTAGCG
CCCAATCATA TAGGTGTTCA TGCTGGAGCA ACCGGCGGTA TGGCTGTGGG CGCTGCCGGG
GGGGCGGCGG CTGGCGGATT CCGTCTGGAA GGTGTGCCGG AGATGGTGTC CATCGCCGCC
CATGCCTCCG CCACACTGCA TTCTTCCATA GGCAACGCAT TGGAGCGCAC GGAAATGTTC
CGTCGGCGCC TCCAGGAATG GGAGCACGCG CGCGATCAGG CCTTGCTCGA GTCCGAACAG
ATCATCTTGC AACTGGCTCT CCACGATGCC CAGGCCCGCA TTACCGCATT ACAACTGCGT
CAGGCCCAAG AGGCAAAAAA ACAGGCCGAG ACCGTTTACG CATTTCTCAA CAAACGCTTC
ACAAACAGCC AGCTCTATCA ATGGCTCAAT GGGCAGTTCT CGACCTTCTA CTACCAGGCC
TATGACGCCA CGTTCTCACT GTGCCTGGCG ACGCAAGCCT GCTGGCAGTA TGAAATTGCC
GACTACTCGG CCTCCTTCAT CCAGCCCGCG GCCTGGAAGG ATGCCTGGCG CGGCCTGACT
GCTGGCGAGG CCCTGAAACT GAATCTGCTG CGCATGGACG CGGCTTACAT GGCCCGCAAC
GAGCGCAAAA TGGAGATCGT CAAAACGGTT TCGGTGCGCC AGCTGCCAGA AGCAGAGGGA
GATGATACGG GGATTAATCA CGGCTGGGAT GCCGTGGTCG AGCGCTTGGC GCAAGACGGG
ATTGCCGAGT TCGAAATCAC CCGAGCCATG CTTGACGAGG ATTACCCGAG CCACTACCTG
CGGCGCATCA AGCGCATCAG TGTGTCGTTG CCAGCCACGG TAGGGCCTTA TCAGGACATC
CGCGCCACCC TGACCCAGTC GTACAGCGCA GTGCAGATGG ACGCCCAGCC TGACGGGCCG
CTCAAAGAAA ACATGCGTGC CAGCCAGCAA ATCGCCTTGT CTACCGGCGT GGACGATGAC
GGCTTGTTCG TTTTCAATTT CGACGACGAG CGCTATCTGC CGTTTGAGGG CACCGGTGCG
ATCTCGCGCT GGACACTGAG CTTTTCCAAC CCGGCATCGC AGCGCGACAT GATCGACTCG
ATCACCGACA TCATCGTGCA CATGCGCTAC ACGGCGAAAA GTCGTTAA
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| Protein sequence | MSDTLESRLN ESFRDALVAY YLSEVVPNDP MLKRLGLDQR LKTANDLYEF FLLDNQVSNE
VQTSYVASAM SSLQQLINGT LLGMEPGYET LLPTEARFVE WRERSSQYPI WAANMQLALY
PEIYISPALR LKKSGYFTQL ENDINQNRIN VDTAQDAVKA YLASFEEVAN LTIINGYIDS
DRFAEGKYYF IGKSRAENIY YWRTVDMNER AYQEGTEGAK FDNPTPGAWS DWKRAEIGIN
ANTLERTIRP VYFNNRLFVT WVDLVHVTEQ VDVTLPAGTV KPGADGSIPI SPPGDTAPVT
VITPNVRLVL NISYKKYDDS WSAPQIYMDV TTPNVFTRAG KAVNLENDLN SIAIFDVSAS
PESLFIAMYA GEALTPGDTD GSTSTYAFLH TAFIDKNFNK TPAFPVANYV DAVSDKADLG
LEQPRVRKTC WAFALKNKGN FQFTWSLYIR LKSSLTTAPN GGETWWNCLG HQNTITDMTG
ALQPVLNLNA SSITLSTALN NDIRGDDYLE VLLTFRVERR SWALKLIVEP DYLTTTFATL
KSGSTLSIST TESVAGKINF TLVTSDATDD NMFDFLLDEN FQNYRISGTA QVKNIENGKC
KSGVISALLY NQAHPGFIRS GVIIIEAPTW SDRLDTTAEG QVLSAKEYTF AQWFSYPLDM
NLPHNDSQKH LTARPPTSSI TAPSRYETTI TFDKSTLLPN LPQTQFISGS KKFYITHGIG
VNSVNPAVWI GNALKSTEIE LEWATADGSD PVSPKINKRI NAILGIAEYI DFSASSIRFS
DNSTTDTRDP IRMNTLFARE LINKANIALE ALLSWDTQQL QEPPIDEDDI PDLMDFKGAN
GLYFWELFLH LPFMISHRLN LEQRFTDAER WLGFIFEPGR KKTGDAPAYW NVRPLVEVPD
PDYFLRAPID PDGIAASDPV RYQKAVYFHY IKNLIDRGDM AYRQLTPDSL GEAKLWYVRI
LDLLGPRPDV KLTSQWMPMA LGDLAASTSP GLRAFEQQLV EQEQQVRISA AINDGKATVS
FSQPSLRLST FGSDPTLNEE DSDHFILPMN SELVKYWDML ESRLYNLRHN MTLDGKPLSL
ALFAAPLDPR ALLAAYANGA TDSGAGSLLA QETPHYRYPV MFARANAAVE TLIQFGFTLL
SIIERKEQGQ LMELQQQQVW EFAQYAIDLQ LEAQKVEVQA RKALEASKAV VDARASFYGQ
LADENVSAGE VAAGAEQLVA RIAEGVAHSV SAVASGLKVA PNHIGVHAGA TGGMAVGAAG
GAAAGGFRLE GVPEMVSIAA HASATLHSSI GNALERTEMF RRRLQEWEHA RDQALLESEQ
IILQLALHDA QARITALQLR QAQEAKKQAE TVYAFLNKRF TNSQLYQWLN GQFSTFYYQA
YDATFSLCLA TQACWQYEIA DYSASFIQPA AWKDAWRGLT AGEALKLNLL RMDAAYMARN
ERKMEIVKTV SVRQLPEAEG DDTGINHGWD AVVERLAQDG IAEFEITRAM LDEDYPSHYL
RRIKRISVSL PATVGPYQDI RATLTQSYSA VQMDAQPDGP LKENMRASQQ IALSTGVDDD
GLFVFNFDDE RYLPFEGTGA ISRWTLSFSN PASQRDMIDS ITDIIVHMRY TAKSR
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