| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4255 |
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| Symbol | |
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| ID | 1185936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4796392 |
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| End bp | 4796724 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395600 |
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| Product | carboxymuconolactone decarboxylase family protein |
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| Protein accession | NP_794014 |
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| Protein GI | 28871395 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGATT GGAAGCAAGC CCGTAAAGAC ATCAACACTC GTTTGGTAGA GCTCAACGGC
CTCTCCCCGG AGACCATGAA AGGCATGGCT GCACTCGGTG CCGCCGGTAG CAAAACCAAT
CACTTGGATG CAAAGACTCG CGAGCTGATC TCCCTGGCGG TGGCCGTAAC AACTCGCTGC
GATGGCTGTA TCGCCTTCCA CGCAGCTGAA GCCAAGAAGC TCGGTGTCAC AAGTGAAGAA
GTGGCCGAAG CACTGGGTGT GGCCATCAAC ATGAACGCCG GTGCAGCACT GGTGTACAGC
ACCCATGTTC TCGATGCGTT CGATAAGTCC TGA
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| Protein sequence | MQDWKQARKD INTRLVELNG LSPETMKGMA ALGAAGSKTN HLDAKTRELI SLAVAVTTRC
DGCIAFHAAE AKKLGVTSEE VAEALGVAIN MNAGAALVYS THVLDAFDKS
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