Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4233 |
Symbol | |
ID | 1185913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4766611 |
End bp | 4767069 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395579 |
Product | membrane protein TctB, putative |
Protein accession | NP_793994 |
Protein GI | 28871375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATAC AACGCATTTT CGCTGCCGTA TTGCTAATGG CCTGCCTGGG CCTGGCCCTA ATGGCCTGGC CGTATCAGGC ACCTTTTTCC TACGAACCGG TCGGGCCGAG GGCCTTTCCA CTGCTGATGC TCGGGCTGAT GGGCGCGGCC CTGCTGTACC TGCTGATTCG TCCCACAGCC ATTGTCCATA CCGAAGAAGA GCCCGCACTG GATCGCGAAA CGCTGGTCAA GATCGGCCTG TGCATCGCCC TGCTGCTGAT CTTCGCCGGG CTGTTTGAAC CGCTGGGCTT CATACTCAGC AGCATCCTGA TCGGCATTCC CATGGCGCGC CTGTACGGCG GGCGCTGGCT GCCCAGCGTC GTGGTGGTCA TTGTAATGAG CATCGGCCTT TACCTGTTGT TCGACAAGGC CATGGACGTT CCCCTGCCTT TGGGCCTGCT CAGCGTTCTG GAGAACTGA
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Protein sequence | MVIQRIFAAV LLMACLGLAL MAWPYQAPFS YEPVGPRAFP LLMLGLMGAA LLYLLIRPTA IVHTEEEPAL DRETLVKIGL CIALLLIFAG LFEPLGFILS SILIGIPMAR LYGGRWLPSV VVVIVMSIGL YLLFDKAMDV PLPLGLLSVL EN
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