Gene PSPTO_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4233 
Symbol 
ID1185913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4766611 
End bp4767069 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID637395579 
Productmembrane protein TctB, putative 
Protein accessionNP_793994 
Protein GI28871375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATAC AACGCATTTT CGCTGCCGTA TTGCTAATGG CCTGCCTGGG CCTGGCCCTA 
ATGGCCTGGC CGTATCAGGC ACCTTTTTCC TACGAACCGG TCGGGCCGAG GGCCTTTCCA
CTGCTGATGC TCGGGCTGAT GGGCGCGGCC CTGCTGTACC TGCTGATTCG TCCCACAGCC
ATTGTCCATA CCGAAGAAGA GCCCGCACTG GATCGCGAAA CGCTGGTCAA GATCGGCCTG
TGCATCGCCC TGCTGCTGAT CTTCGCCGGG CTGTTTGAAC CGCTGGGCTT CATACTCAGC
AGCATCCTGA TCGGCATTCC CATGGCGCGC CTGTACGGCG GGCGCTGGCT GCCCAGCGTC
GTGGTGGTCA TTGTAATGAG CATCGGCCTT TACCTGTTGT TCGACAAGGC CATGGACGTT
CCCCTGCCTT TGGGCCTGCT CAGCGTTCTG GAGAACTGA
 
Protein sequence
MVIQRIFAAV LLMACLGLAL MAWPYQAPFS YEPVGPRAFP LLMLGLMGAA LLYLLIRPTA 
IVHTEEEPAL DRETLVKIGL CIALLLIFAG LFEPLGFILS SILIGIPMAR LYGGRWLPSV
VVVIVMSIGL YLLFDKAMDV PLPLGLLSVL EN