Gene PSPTO_4192 details

Gene Information

• Locus tag: PSPTO_4192
• ID: 1185872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4723046
• End bp: 4723645
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637395538
• Product: hypothetical protein
• Protein accession: NP_793953
• Protein GI: 28871334
• COG category: [K] Transcription
• COG ID: [COG1695] Predicted transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA TGCGTGAAGA TAAACATCCT CCCCATCACC GTCCGCCGCA CCTGCGCGAA 
GCAGGCGAAG ACCGCGACGG TTTTGAAAAA CGCCCGGGCC GTGAGCGCGG TGGACGCGGC 
CCGCGGGTCT TTGCTCCGGG CGATCTGAAA TTGCTGCTGT TGGCGCTGAT CGCCGAACAG 
CCGTCCCACG GCTACGACCT GATCCGCAAG ATCGAAGGCC TGTTCGACGG CGCGTATTGC 
CCAAGCCCAG GTGTTATCTA CCCGACCCTG ACCTTTCTTG AAGAAAGCGA GATGGTGCTC 
GGCGATGCCC AGGCAGGCAA AAAGCTCTAC ACCGTGACCG ATGCCGGTCG CAGCTCATTG 
CAGGATCAGG CCGTTGCGCT GGAAGGTGTA CGGATGCGCA TCGATGTCAG CAAGCGCTCG 
CTGCGCGGCC ATGATCGCCC GGCAGAAATT CATGAAGCCG TGCATAACCT TCGCCACGCG 
TTACAGATGC ATCACGGCCG CTGGACTCCG GAAGAAATCC TGCGGGTCAG CGAGTTGCTC 
AACACCACTG CCAAGGCCGT CGTCGATGGG CCTCAACCTG CATCGGAGGC TTCAGTATGA 

 

Protein sequence

MKNMREDKHP PHHRPPHLRE AGEDRDGFEK RPGRERGGRG PRVFAPGDLK LLLLALIAEQ 
PSHGYDLIRK IEGLFDGAYC PSPGVIYPTL TFLEESEMVL GDAQAGKKLY TVTDAGRSSL 
QDQAVALEGV RMRIDVSKRS LRGHDRPAEI HEAVHNLRHA LQMHHGRWTP EEILRVSELL 
NTTAKAVVDG PQPASEASV