| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4144 |
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| Symbol | |
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| ID | 1185824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4671393 |
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| End bp | 4671959 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395490 |
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| Product | deoxycytidine triphosphate deaminase, putative |
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| Protein accession | NP_793905 |
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| Protein GI | 28871286 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AATCGGACAA GTGGATTCGC CGCATGGCGC AGGAACACGG CATGATCGAG
CCCTTCGTCG AGCGCCAGGT GCGTGGCGAA GGCGCCAACC GGGTGATCTC GTTCGGGGTG
TCCAGCTACG GTTACGATGT GCGTTGCGCC GACGAATTCA AGGTGTTCAC CAACATCAAT
TCGGCTACCG TCGACCCGAA AAATTTCGAT GAAAAAAGTT TTGTCGATAT CAAAAGCGAC
GTCTGCATCA TCCCGCCCAA TTCGTTCGCG CTGGCCCGCA CCGTCGAATA TTTCCGTATT
CCGCGCAACG TTCTGACCAT CTGTCTGGGC AAAAGCACCT ACGCGCGCTG CGGCATCATC
GTCAACGTCA CGCCGCTCGA GCCGGAATGG GAAGGGCATG TGACACTGGA ATTTTCCAAC
ACCACCACGC TGCCAGCCAA GATCTACGCC AATGAAGGCG TGGCGCAGAT GCTGTTTCTG
GAGTCCGACG AGGAGTGTGA AGTTTCCTAC AAGGACCGTG GCGGCAAGTA CCAGGGCCAG
CGTGGCGTCA CCCTGCCGCG CACCTGA
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| Protein sequence | MSIKSDKWIR RMAQEHGMIE PFVERQVRGE GANRVISFGV SSYGYDVRCA DEFKVFTNIN
SATVDPKNFD EKSFVDIKSD VCIIPPNSFA LARTVEYFRI PRNVLTICLG KSTYARCGII
VNVTPLEPEW EGHVTLEFSN TTTLPAKIYA NEGVAQMLFL ESDEECEVSY KDRGGKYQGQ
RGVTLPRT
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