Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4130 |
Symbol | |
ID | 1185810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4654399 |
End bp | 4654893 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637395476 |
Product | hypothetical protein |
Protein accession | NP_793891 |
Protein GI | 28871272 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTTC AGGCGCACAT TACAAGAATC ATAAGCCTTG CGTTGGTCAT GTTCGGGCTG AGTGGATGCT CGTACCTGAG TTTTGACCGC TTCGAGGATC CAGAAGTGCA GTTGTTGAAA GTCCAGGTGG TCAAGGCCAG GCTGACGCAA CAGGATTTCA AGCTGTATTT CGAGGTCGAC AATCCTAACG ACTCCAGCCT GTTCGTACGA GGCCTGAACT ACAAGATCAT GCTCAATGAG GTGGTGCTCG CCGATGGCAA ATCCAGCGAC TGGTTTTTTG TCGACGGTCA CAGCCAGAAA ACCTTTGTGG TGCCCATCCG CACCAACCTC TGGGGGCACG CCAGGTACAT CGCTCAATTG CTGAAGAAGC CCGATGAGCT GATCCACTAC AGATTTGAAG GCAAACTCAA GACCGGCATG GTCTTCAGGC ACAGCGTGCG GATCGGCAAG TCTGGCGATG TGGCCCCGTA CGAACTTATC CAGCACCGCA AATAG
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Protein sequence | MFFQAHITRI ISLALVMFGL SGCSYLSFDR FEDPEVQLLK VQVVKARLTQ QDFKLYFEVD NPNDSSLFVR GLNYKIMLNE VVLADGKSSD WFFVDGHSQK TFVVPIRTNL WGHARYIAQL LKKPDELIHY RFEGKLKTGM VFRHSVRIGK SGDVAPYELI QHRK
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