| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4117 |
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| Symbol | |
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| ID | 1185797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4641196 |
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| End bp | 4642341 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395463 |
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| Product | ompA family protein |
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| Protein accession | NP_793878 |
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| Protein GI | 28871259 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.190618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCCA ATAAAAGCCT CGTTCTCGCC CTGTGCATCG CTGTTACCGG CTGTGCTCAA
ACTCCTCAGT CCGACTCTGC TGCAACCGGA GGCCATTGGT GGCAGTTCGG TTCTGGCAGC
GAGTCTTCCG ATGCCGGCAC CGATGCGAAA GCTCCCGCAC CGGCTCCGGC GCCCGCTCCG
GTGGCCAAGG CTGCTGCAAC ACCGGCCGCT GCGGCTGGCG CTGAAAGCAG CGGCCCGTGG
TACTGGCCGT TCGGCTCCAA TGACAACGCG CAGGCAAAGC CTGATGCCGT TGCCAGCAAG
CCGGCAGACA AGCCTGCTGC GCCTGCGATG GTTGCCAAGT CGGAGACCGA TACCAAGTGG
TGGTGGCCGT TTGGTGCCGA AGGGCAGAAG GACGAGCCTA AAGCGCTGCC GATGCCCGAT
CCGAAAGTGA CCCAGGCCTG GCTGGACGAG TACGAGCCGC GTCTGCGCGC TGCCATCAAG
GACAGCCCGT TCCAGCTGGA ACGTCGCGAA GACCTGCTGG CGATCACTGC GCCGGTCGAC
AGCTCCTTCA ACCCGGACCG CCCGGCCATG TTGCTGCCCA ACACACTGGG CCCGATCACT
CGTCTGGCCA AGGTGGTCGA AGGTGATCAG AAGACCGCAG TGCTTATCCT CGGCCACGCT
GACACATCGG GCCCTACCGA AGGTAACCAG AAGATCAGCC AGGAGCGTGC GCAATCCGTT
GCCGCGATCT TCCGCCTCAG TGGTCTGGAG CGTAATCGCC TGAGTCAGCG TGGCATGGGC
GCGGTCATGC CGCGTGCCGC CAACGACAGC CTGGAAGGCC GTGCGCTCAA TCGCCGTGTC
GAGATTCTCA TGACGCCGCA GGACACCATG CGCGCCCTGA TGGCCCGTTA CGCGCTGCCG
CCGGTTGCTC CCGTCATGGT CGCCACCCAG AACGTCAAGC CAGTAGCGCC AGCACCTGCT
GCCGCGCCTG CCAAGAAAGC CGCCGTGGCG AAGAAAGACA CTGCCAAGAA AGCGCCGGCC
AAGGCCAGCA CCGCCAAAAA GGCTGCGCCT GCCAAGACCA CCACCGCTGC GGCTAAAAAG
CCAGCAGCCA CCAAGGCCTC GGCCAAAGCG CCTGCCAAGA AAGATGACAG CCAGGCCAGT
AACTGA
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| Protein sequence | MSSNKSLVLA LCIAVTGCAQ TPQSDSAATG GHWWQFGSGS ESSDAGTDAK APAPAPAPAP
VAKAAATPAA AAGAESSGPW YWPFGSNDNA QAKPDAVASK PADKPAAPAM VAKSETDTKW
WWPFGAEGQK DEPKALPMPD PKVTQAWLDE YEPRLRAAIK DSPFQLERRE DLLAITAPVD
SSFNPDRPAM LLPNTLGPIT RLAKVVEGDQ KTAVLILGHA DTSGPTEGNQ KISQERAQSV
AAIFRLSGLE RNRLSQRGMG AVMPRAANDS LEGRALNRRV EILMTPQDTM RALMARYALP
PVAPVMVATQ NVKPVAPAPA AAPAKKAAVA KKDTAKKAPA KASTAKKAAP AKTTTAAAKK
PAATKASAKA PAKKDDSQAS N
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