| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4061 |
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| Symbol | |
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| ID | 1185741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4568345 |
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| End bp | 4569220 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395408 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793823 |
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| Protein GI | 28871204 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAACTGG TTTGGCTTGA AGATCTTTCA GCGCTTGCGG AGTACGGCAG CTTTGTTCGT
GCCGCGCAGG CACGCCATGT CACCCAGCCG GCCTTCAGCC GCAGAGTTCG GTCACTGGAG
AACTGGATGG GGGTTGCGCT ATTTGTCCGC ACACCTCAAG GCGCAACCCT CACCGAGGCC
GGAAGGCAGA TCTTGCCCAG CGCCCAGGAA GCCGCTCGAC ACTTGTACCG GATGCGCAGT
GAGGCCCAGG AAGTTGCTGG CGTGGCAGCC AAGTCACTCA ACTTCGCGGC AACCCACTCG
CTGTCGTTCA CCTTCTTCCC CAAGTGGCTG CGAAGCTCGG AAAGCGGAGC GCTTATCGAA
GCCGTGCAGT TGCATTCCGA CAGCATGGCG GTCTGCGAGC AAATGCTGAT ACATGGCCAA
GTGCAGTTTT TGCTCTGCCA CCGCCACCCC GACGTACCGC CTTTACTGGC CCCGGATCAG
TTCATCAGCA AGAAGGTGGG CGAGGACGTT CTCGTACCGC TTGCAAGCGC TTCCACCCAC
TTCGGCACCT CACCTGCGGC ATTGCCCTAC CTCGCTTACA CCCATGAATC CGGACTGGGA
CGCATCGTCG CCCACAGGTT GCGTGGCAAG GAAGATTACC TTCACCTCAA GCCCCTGTTC
AGCAGCCACC TTGCGGCGGT ACTCATGTCC ATGGCCCTGG AAAGTAAGGG CGTGGCGTGG
CTACCCAAGA GCCTCACCGA ACAGGAAGTT CAGGACGGGC GTTTGGTCAG AGCGCTCGAT
GAGAGCTGGG ACATACCGCT GGAGATTCAT TTGACCAGGC CGAAGGCAGT GCTTAGTCAG
TCTGCGGAAG AGTTTTGGGG GAGGGCGGGG TGGTGA
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| Protein sequence | MELVWLEDLS ALAEYGSFVR AAQARHVTQP AFSRRVRSLE NWMGVALFVR TPQGATLTEA
GRQILPSAQE AARHLYRMRS EAQEVAGVAA KSLNFAATHS LSFTFFPKWL RSSESGALIE
AVQLHSDSMA VCEQMLIHGQ VQFLLCHRHP DVPPLLAPDQ FISKKVGEDV LVPLASASTH
FGTSPAALPY LAYTHESGLG RIVAHRLRGK EDYLHLKPLF SSHLAAVLMS MALESKGVAW
LPKSLTEQEV QDGRLVRALD ESWDIPLEIH LTRPKAVLSQ SAEEFWGRAG W
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