| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4021 |
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| Symbol | |
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| ID | 1185700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4532376 |
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| End bp | 4533086 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395368 |
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| Product | S4 domain protein |
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| Protein accession | NP_793783 |
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| Protein GI | 28871164 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACC CCATTCGCCT TTCCAAACGC CTTATTGAGC TGGTCGGTTG CTCCCGCCGG
GAGGCCGAAC TGTTTATCGA GGGTGGCTGG GTCACAGTGG ATGGCGTGGT TATCGACGAG
CCGCACTTCA AGGTCAGCAC CCAGAAAATC GAACTGAGCC CGGACGCCAA GGCCGATTCG
CCGGAATCAG TCACCATCAT TCTGCACAAG CCTGCCTCGG CCAGCGCCGA AAGCGCCTTG
CAAATGATTA CCCCGGGCAC CCTTTCTGCA GAGCATAGCT ACAGCAAGCG TCCGCTCAAG
GGCCATTTCA TGCGCCTTGA GGCGATTTCG AGCCTGCAAG CCAATGCCAG CGGGCTGATG
GTGTTCAGCC AGGACTGGAA AATCCTGCGC AAGCTCACCG ACGACCGCAG CAAGATCGAG
CAGGAATACG TGGTAGAAAT CTCGGGCGAG ATGGTCGCTC ACGGCCTGAA CCGTCTCAAC
CACGGCCTGA CCTACAAGGG CAAGGAATTG CCCGCCGTGA AGGCCAGCTG GCAGAACGAG
AACCGCCTGC GTTTTGCGAT GAAAAACCCG CAGCCCGGCA TCATCGCCCT TTTATGTGAG
GCCGTCGGCC TGAAAATCGT CGCCATTCGC CGCATCCGCA TCGGCGGCGT GTCCATGGGT
AAACTGCCCG AAGGCCAGTG GCGCTACATG ACGACCAAGG AAAAGTTCTG A
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| Protein sequence | MTDPIRLSKR LIELVGCSRR EAELFIEGGW VTVDGVVIDE PHFKVSTQKI ELSPDAKADS
PESVTIILHK PASASAESAL QMITPGTLSA EHSYSKRPLK GHFMRLEAIS SLQANASGLM
VFSQDWKILR KLTDDRSKIE QEYVVEISGE MVAHGLNRLN HGLTYKGKEL PAVKASWQNE
NRLRFAMKNP QPGIIALLCE AVGLKIVAIR RIRIGGVSMG KLPEGQWRYM TTKEKF
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