Gene PSPTO_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3868 
Symbol 
ID1185539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4381115 
End bp4381972 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content58% 
IMG OID637395219 
Producthypothetical protein 
Protein accessionNP_793640 
Protein GI28871021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.312914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA TGCACAAGCA ACTGTTTCTG GCCAACCGGG CGCTTATCGA AAAGCTGGTA 
CCCATCCCCC GGGAAATTCT TGCTTTCGAG CAAGGCTGGA TCGACGACGC CATCGAACGC
AGCATGACAG CGGATGCTCC GGCCGACCTC GCCAGCCTGC GCAGGAAGCT GGTTGAACTG
GTCGAACTGG AGAGCAGCGA AGTACCGCCC AGCGCCCAGT ACGTCGCCAC TGACATGACG
CTCGACGAGT TCCGGATTCT GGTTCAGGAG TTTGCCCTGG ATGGCCTGAC CGAAGCGCAG
GTCTTCTACC ACCTGATGCC AAGACTCAGC CTGCCCGCGC AGATGCCCAT GCTGCGCATG
ATGATTGACG AGTTCGGCTC GGGAAATCTC AAACGCTCGC ATACCACGCT CTATCAAGAC
TTGCTGAGCG AACTGGAAAT GCCGCTGGAC CTGCCGTTCT ACGTCGAGGC CAATTCCAGC
GCCGGCTTCA CGTTTCCCAA TATGTTCTGC TGGCTGGCGA TGCGCGCCGA CGACCCGTCA
TGGTTCGCTG GGGTCATCAC ATACTTCGAG ACTGTGGTGC CGTTCTTTTT CGAGTGTTAC
ACCCAGCTCT GCGAGCGCTT GCAGATACAG GCTCACACTT ACTATTCGGA ACACGTTCAT
ATCGACGTTT TCCGTGCCAT CGAGGGTCAG CGCCTGCTCA AGGCCATGGA CGTCAGCGGA
GATCTGGACC CGGTGAAAGC CTGGCGCGGT ATCTGTATGG GCCGCGAGAT CACCAATTCG
GCGTTCGACA TGGCCGTAGA CAAGGCCCGT CGTCTCAAGC ATTTCAACAA GGAGGCGATC
CTTGAACGAG CCTGCTGA
 
Protein sequence
MESMHKQLFL ANRALIEKLV PIPREILAFE QGWIDDAIER SMTADAPADL ASLRRKLVEL 
VELESSEVPP SAQYVATDMT LDEFRILVQE FALDGLTEAQ VFYHLMPRLS LPAQMPMLRM
MIDEFGSGNL KRSHTTLYQD LLSELEMPLD LPFYVEANSS AGFTFPNMFC WLAMRADDPS
WFAGVITYFE TVVPFFFECY TQLCERLQIQ AHTYYSEHVH IDVFRAIEGQ RLLKAMDVSG
DLDPVKAWRG ICMGREITNS AFDMAVDKAR RLKHFNKEAI LERAC