Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3868 |
Symbol | |
ID | 1185539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4381115 |
End bp | 4381972 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395219 |
Product | hypothetical protein |
Protein accession | NP_793640 |
Protein GI | 28871021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.312914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCA TGCACAAGCA ACTGTTTCTG GCCAACCGGG CGCTTATCGA AAAGCTGGTA CCCATCCCCC GGGAAATTCT TGCTTTCGAG CAAGGCTGGA TCGACGACGC CATCGAACGC AGCATGACAG CGGATGCTCC GGCCGACCTC GCCAGCCTGC GCAGGAAGCT GGTTGAACTG GTCGAACTGG AGAGCAGCGA AGTACCGCCC AGCGCCCAGT ACGTCGCCAC TGACATGACG CTCGACGAGT TCCGGATTCT GGTTCAGGAG TTTGCCCTGG ATGGCCTGAC CGAAGCGCAG GTCTTCTACC ACCTGATGCC AAGACTCAGC CTGCCCGCGC AGATGCCCAT GCTGCGCATG ATGATTGACG AGTTCGGCTC GGGAAATCTC AAACGCTCGC ATACCACGCT CTATCAAGAC TTGCTGAGCG AACTGGAAAT GCCGCTGGAC CTGCCGTTCT ACGTCGAGGC CAATTCCAGC GCCGGCTTCA CGTTTCCCAA TATGTTCTGC TGGCTGGCGA TGCGCGCCGA CGACCCGTCA TGGTTCGCTG GGGTCATCAC ATACTTCGAG ACTGTGGTGC CGTTCTTTTT CGAGTGTTAC ACCCAGCTCT GCGAGCGCTT GCAGATACAG GCTCACACTT ACTATTCGGA ACACGTTCAT ATCGACGTTT TCCGTGCCAT CGAGGGTCAG CGCCTGCTCA AGGCCATGGA CGTCAGCGGA GATCTGGACC CGGTGAAAGC CTGGCGCGGT ATCTGTATGG GCCGCGAGAT CACCAATTCG GCGTTCGACA TGGCCGTAGA CAAGGCCCGT CGTCTCAAGC ATTTCAACAA GGAGGCGATC CTTGAACGAG CCTGCTGA
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Protein sequence | MESMHKQLFL ANRALIEKLV PIPREILAFE QGWIDDAIER SMTADAPADL ASLRRKLVEL VELESSEVPP SAQYVATDMT LDEFRILVQE FALDGLTEAQ VFYHLMPRLS LPAQMPMLRM MIDEFGSGNL KRSHTTLYQD LLSELEMPLD LPFYVEANSS AGFTFPNMFC WLAMRADDPS WFAGVITYFE TVVPFFFECY TQLCERLQIQ AHTYYSEHVH IDVFRAIEGQ RLLKAMDVSG DLDPVKAWRG ICMGREITNS AFDMAVDKAR RLKHFNKEAI LERAC
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