| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3864 |
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| Symbol | psyI |
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| ID | 1185535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4377652 |
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| End bp | 4378386 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395215 |
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| Product | autoinducer synthesis protein PsyI |
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| Protein accession | NP_793636 |
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| Protein GI | 28871017 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.70516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAGCG GGTTTGAGTT TCAGGCGGCC AGTTACGTTC ATATGCCCGT TGAGTTGCTG
GAGTCGCTGT ATTCCATGCG TAAGAATATT TTTTCAGACC GGCTTGAATG GAATGTTCGT
GTCAGTGATA CATTCGAGTT CGATGAGTAC GACAATGCCG ATGCGACGTA CCTGGTCGGT
AGCTGGAACG GCATTCCACT GGCCGGATTA CGGCTGATCA ACACCTGCGA CAGCTATATG
CTTGAAGGCC CTTTTCGCAG TTTTTTTGAT TATCAGCCAC CCAGGAATGT TCGCGTTGTT
GAGTCCAGTC GTTTCTTTGT CGACACGATT CGCGCTCGTT CGCTGGGTAT TGCGCATGCA
TCGCTGACCG GGATGCTGCT GTTCGCCCTG CACAACCACG TGGCGTCGTC TGGCCTGGAT
TCAGTCATCA CGGTGGTCAG CAAGGCGATG GCGCGAATTG TGCGCAAAGC CGGATGGGTC
TACAGGGTTC TGGCGACCGG AGAAGCAACG CCTGGCGAAA CAGTGCTATT GCTGGAAATG
CCCGTGACGG CTGATAACCA CCGTCGCTTG CTCGATAACA TTGCCCTCAG GCAGCGTGTT
ACGGATGACC TGCTGCGCTG GCCGATAGCG CTCGGTCCAT CGGGTTGCGC GCAACGGGCC
TGCGTCTCAG ACCATGCCCA TCTTGATGGC CTTGTAAACG GCCTGCTTTG CAGTGCGGAC
CTCGAGTTTG CTTGA
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| Protein sequence | MSSGFEFQAA SYVHMPVELL ESLYSMRKNI FSDRLEWNVR VSDTFEFDEY DNADATYLVG
SWNGIPLAGL RLINTCDSYM LEGPFRSFFD YQPPRNVRVV ESSRFFVDTI RARSLGIAHA
SLTGMLLFAL HNHVASSGLD SVITVVSKAM ARIVRKAGWV YRVLATGEAT PGETVLLLEM
PVTADNHRRL LDNIALRQRV TDDLLRWPIA LGPSGCAQRA CVSDHAHLDG LVNGLLCSAD
LEFA
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