Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3861 |
Symbol | |
ID | 1185532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4375128 |
End bp | 4375580 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637395212 |
Product | transcriptional regulator, MarR family |
Protein accession | NP_793633 |
Protein GI | 28871014 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.611772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCAG CCGAACCGGA TACGTGGTTC AGATTCGTCA AGGCGCACCG CTGTCTGATC CGCGAAATCG AACGACGTCT GGCCGCAGCC GAACTGCCAC CCTACGCGTG GTACGACGCG CTCTGGGGCG TGGAAAGCGG CCCTCAGGGC ATGCGGCGCA TGCATGAACT GGCCGATGTC ATGGCCATCG AACGCTACAA CCTGACCCGC CTTGTCGACC GCCTCGAAAG CGAAGGGCTG GTGGAACGCC GCCGCTCCGA CAGTGACGGT CGAGGCGCTG TCGCAGCGAT TACCGAGAAG GGCCGAACGC TGCGCAAACA GATGTGGCAG ATCTACCAGA CGGCAGTGGC CGAGCTGTTT CTGGCGCAAT TCGACGGCCA GCAACGCCAG GTGTTTGCCG ACGCACTGGA GCGTGCTGCG CTGGCAGCCC GGCAAAGCGG CGCCAAGGGC TGA
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Protein sequence | MSSAEPDTWF RFVKAHRCLI REIERRLAAA ELPPYAWYDA LWGVESGPQG MRRMHELADV MAIERYNLTR LVDRLESEGL VERRRSDSDG RGAVAAITEK GRTLRKQMWQ IYQTAVAELF LAQFDGQQRQ VFADALERAA LAARQSGAKG
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