| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3678 |
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| Symbol | |
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| ID | 1185343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4143736 |
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| End bp | 4144590 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395025 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793452 |
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| Protein GI | 28870833 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAA TTCTCGATAT CGAGCTGGTA CGTACTTTTC ATGCAGTGGC GCGACTGGGC
AAGTTTTCGG CGGCCGCCGA GCAGCTTCAC AAGAGCCCGG CGGCCGTGAG CGTGCAAATC
CAGCGACTTG AAGCGGTGGC AGGCGGGCGC TTGCTTAACC GGGACAACCA GGCGGTGTCC
CTGACTGCGC TGGGCAAGCG CCTGTTGTCG TCGACTACAG AATTGCTTTG CACCCACGAC
CGGGTGCTGG CCGATTTGCA TGGCACGCAC CTGGCGGGAC GCATTACGCT GGGCGTCCCG
GACGAGTACG CTGTGCATGT TATCCGCGAC ATCCTGCCGG TGTTCGCGGC GGCCTGGCCC
AACGTGGTGC TGGAGCTGAA AACCGCACCC AGCTTCACCC TGCGCGAGCA GGTACTGCGC
GGCAAGCTGC AAGCAGCGGT CATCGCGCAG CCCAAAGGGC AGTTGAATGC TGAAGCGCAG
TTTCTGGTAT CCACCAAGCC GGTCTGGGTC GGGCCGGTAA ACGCTACGCT GGCCTCGACA
GACCCGTTGC CGCTGGCCGT TCACGCCGCG CAGTGCCCTT ATCGCGAAGC TATGATGGCG
TCACTCAGGC ACAACGGCCG CAAAACCCGC GTGGTCCTGG AAAGCCCCTC CAATCAGGCG
ATCAAAGCCT GCGTAGAAGC GGGCCTGGCG GTCAGCCTCA TTGATCGAAG CGGGGTTACA
GAGGCCATGC AGATCCTCAA TGATCTACCC GAGATAGCCG AGCACGAAAT CGTCTTCCTG
CGCTCGCCCG CGTCACAGAC CGACGAGGCG GTGAGTCTGT TGGCGCAGGC GATGCAGAAG
TATTTTCGGG TTTAA
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| Protein sequence | MTAILDIELV RTFHAVARLG KFSAAAEQLH KSPAAVSVQI QRLEAVAGGR LLNRDNQAVS
LTALGKRLLS STTELLCTHD RVLADLHGTH LAGRITLGVP DEYAVHVIRD ILPVFAAAWP
NVVLELKTAP SFTLREQVLR GKLQAAVIAQ PKGQLNAEAQ FLVSTKPVWV GPVNATLAST
DPLPLAVHAA QCPYREAMMA SLRHNGRKTR VVLESPSNQA IKACVEAGLA VSLIDRSGVT
EAMQILNDLP EIAEHEIVFL RSPASQTDEA VSLLAQAMQK YFRV
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