Gene PSPTO_3667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3667 
Symbol 
ID1185332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4135494 
End bp4136024 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID637395014 
Producthypothetical protein 
Protein accessionNP_793441 
Protein GI28870822 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGT TGCAGAACCC AAAGCCCTCG AGCCTGAGCC GCGATGCGTT TATCGCTACC 
TATGCCGATA TCTACGAGCA TTCGCCATGG GTCGCAGAAC AGGCATTTAA CCAGGACGCA
GGCCCTGAGC TGGATCAGCT CGACACCCTG CATGCGCGCT TGAGCGACAT CCTGCTCAAT
GCCACTCACG CGCAGCAACT GGCGCTGATC AATGCTCACC CGGATCTGGC GGGCAAGGCT
GCCGTCAAAG GTGAGCTGAC CCAGGCCAGT ACCGATGAAC AGGCGGGTGC CGGTATCCAC
CTCTGCACGC CTGACGAATT CCAGCGCTTT ACCGAGCTGA ACGGGGCTTA CAAGGCCCGC
TTCGGCTTTC CGTTCATCAT GGCGGTCAAG GGCAGCGACA GGCACAAAAT TCTGGCAGCG
TTTGAGCAAC GCATCCATCA CTCGCCCGAG GCCGAGTTCG CTTGCGCTCT GGCCGAGATC
AACAAAATCG CATTGTTTCG TTTGCAGGCG CTGCACGCGT CGCAGGCATA A
 
Protein sequence
MSELQNPKPS SLSRDAFIAT YADIYEHSPW VAEQAFNQDA GPELDQLDTL HARLSDILLN 
ATHAQQLALI NAHPDLAGKA AVKGELTQAS TDEQAGAGIH LCTPDEFQRF TELNGAYKAR
FGFPFIMAVK GSDRHKILAA FEQRIHHSPE AEFACALAEI NKIALFRLQA LHASQA