Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3667 |
Symbol | |
ID | 1185332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4135494 |
End bp | 4136024 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395014 |
Product | hypothetical protein |
Protein accession | NP_793441 |
Protein GI | 28870822 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGT TGCAGAACCC AAAGCCCTCG AGCCTGAGCC GCGATGCGTT TATCGCTACC TATGCCGATA TCTACGAGCA TTCGCCATGG GTCGCAGAAC AGGCATTTAA CCAGGACGCA GGCCCTGAGC TGGATCAGCT CGACACCCTG CATGCGCGCT TGAGCGACAT CCTGCTCAAT GCCACTCACG CGCAGCAACT GGCGCTGATC AATGCTCACC CGGATCTGGC GGGCAAGGCT GCCGTCAAAG GTGAGCTGAC CCAGGCCAGT ACCGATGAAC AGGCGGGTGC CGGTATCCAC CTCTGCACGC CTGACGAATT CCAGCGCTTT ACCGAGCTGA ACGGGGCTTA CAAGGCCCGC TTCGGCTTTC CGTTCATCAT GGCGGTCAAG GGCAGCGACA GGCACAAAAT TCTGGCAGCG TTTGAGCAAC GCATCCATCA CTCGCCCGAG GCCGAGTTCG CTTGCGCTCT GGCCGAGATC AACAAAATCG CATTGTTTCG TTTGCAGGCG CTGCACGCGT CGCAGGCATA A
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Protein sequence | MSELQNPKPS SLSRDAFIAT YADIYEHSPW VAEQAFNQDA GPELDQLDTL HARLSDILLN ATHAQQLALI NAHPDLAGKA AVKGELTQAS TDEQAGAGIH LCTPDEFQRF TELNGAYKAR FGFPFIMAVK GSDRHKILAA FEQRIHHSPE AEFACALAEI NKIALFRLQA LHASQA
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