Gene PSPTO_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3659 
Symbol 
ID1185324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4125587 
End bp4126246 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID637395006 
Producttranscriptional regulator, GntR family 
Protein accessionNP_793433 
Protein GI28870814 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.712935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCA AGGCCCCGGA CAGCCTCGCT GAGCAAATTG CTCATCACCT TGCCGAGCGG 
ATCATTCGCG GTGAGCTCAA GCCTGGAGAG CGCATTCAGG AGCAGAAAGT CACGCAGGCG 
TTGAACGTCA GTCGTGGCTC TGTGCGCGAA GCATTATTGA TCCTCGAACG CCGCCATCTG 
GTGGTGATCC TGCCGCGTCG TGGCGCACAA GTGACCGTGC TCAATGCCCA CAACGTCACC 
AGCCTGTGCA ACCTGATGAG CGAGCTGTAT ATCCTGCTGG CCAATGCCGT CGCACAGCGC 
TGGCAGAGTG AAGACGAGCT CGCGCCGTTT CTGCAGAGCC AGCAGCGCCT GCAGGCCAGT 
TTCGAGCAGC AGGACGTCAG GATGTTCGTC GAAGAGAGCT TCAACGTGAT GCGCGCGGCC 
TATCCGTTCG CCAACAACCT GTACCTTGAA GAAACCGTCG AGAACCTGCA GCCTTCGATG 
AGTCGCAGCT ATTTTCTGGC GCTTGAGCAG CGCAAGGCTG AAATGAGCGA GTATCTGGCG 
CTGTTCGGTG ACATGCTCGC CGCCGTCCTG GCGCGCGATC TGGCGCAGAT TCGCGTGGTG 
CTGACCCGCT ACTGTCAGCG CAGTTGCCAG CTCGTGCTGT CCGCTCTGGA AGCGAGCTGA
 
Protein sequence
MTFKAPDSLA EQIAHHLAER IIRGELKPGE RIQEQKVTQA LNVSRGSVRE ALLILERRHL 
VVILPRRGAQ VTVLNAHNVT SLCNLMSELY ILLANAVAQR WQSEDELAPF LQSQQRLQAS 
FEQQDVRMFV EESFNVMRAA YPFANNLYLE ETVENLQPSM SRSYFLALEQ RKAEMSEYLA 
LFGDMLAAVL ARDLAQIRVV LTRYCQRSCQ LVLSALEAS