Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3650 |
Symbol | |
ID | 1185315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4111338 |
End bp | 4112618 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637394998 |
Product | hypothetical protein |
Protein accession | NP_793425 |
Protein GI | 28870806 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.574815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTTAC CATGCAATGA TAATATCACT AAGAACACCA AAAACCTTAA TGCTAAAAAC TATTTACAGG GACGAACAAT GTATATAACT CGGATAAAAA TCAAAAACTT TCGCTCTTTG GTAGACGTAG AAATATTTCC AAAAAATTAT ACAGTTTTTG CTGGTGCAAA TGACTCAGGA AAAAGCAATG TACTCCGAGC ATTAAATCTG TTTTTCAACG GCCAGACGGA TATAGGTAAA AACTTAGTAT TCAGTCAAGA CTACGCACAA CAAGCTGTTA TTAGAGCAAA TAAAGCGAAA GAGATTTTAG TGGAACTTGA GTTCAGCCCA CCTAGCAACT ACACGGATAA CCAACCCGTA GTATGGAGAA AATTTTGGCG CGAAGGCTCT ATTCTGCCCT ATCACGAACA AATTAACATG ATCAATGGAG AGGCATTCAG CCCAAGATCA AGAACAGAAT ACTGGATTCG ACAAATTGCA TACGAATATG TACCTGCCAT TCGGGGAAAT GAGTTTTTTG CGACCTTGAA AAGAAGACTC CATAACACAT TAGCTGAAAC CATTGCACCT AAATTGGCTA CTGCATCGGG CCGCTTTCTT AGCAGCATTC GAAAAGAAGT TGTTTCGATT GAACAGGAGG CTCGTAGACT ATTTGATCTT CAAACTGAAT TTTCACTACC CAGCGACTTA GGCAGTCTTT TTGAAATTCT AGACCTAAAG ACAGCGGACA AGCATGCAGC AACACCGCTC CAAAACCGGG GAGATGGCAT TCAGGGCCGA CATATTCCGG TAATACTCAG ATTTCTCGCT GAACAACGCA AAATTAATTT TGCTCGCGGC AAGCCATCTC CGGAGACAAT ATTTGGGTAT GAGGAACCAG AAAATAACTT GGAGCTTTCT AAGCAAATTG AGGAAGCCGA TGAGTTTTAT CGCAGTTCAA ACTCGATACA GGTCTTACTC ACCACCCACT CTCCAGCTTT TTATAGCGTT ACTAAATCTC AAGCTCTAGC TAGCGCTTGG TATGCGGTAA GAGCTGCTGG CAGCACGAGC TTTCAAAATT CGGCAACCAC GCAAAGCTTG GATGCAGGGT TAGGCTTAAT GCCATTTATC GAGCCCTATC TACACAGAGC GGCCAATGAC CGTGCTGAGA TGCTAGAAGA ACTCAATAAA CTTCACTCTC AATCTCTTCA TGTCGATAAA GCTGTTATTT GTGTCGTAAG CGATCCACCA ACCACACCTA CCATCAGATG CGGCTTCCGT TTATCTTGGC ATTTCCGGTG A
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Protein sequence | MLLPCNDNIT KNTKNLNAKN YLQGRTMYIT RIKIKNFRSL VDVEIFPKNY TVFAGANDSG KSNVLRALNL FFNGQTDIGK NLVFSQDYAQ QAVIRANKAK EILVELEFSP PSNYTDNQPV VWRKFWREGS ILPYHEQINM INGEAFSPRS RTEYWIRQIA YEYVPAIRGN EFFATLKRRL HNTLAETIAP KLATASGRFL SSIRKEVVSI EQEARRLFDL QTEFSLPSDL GSLFEILDLK TADKHAATPL QNRGDGIQGR HIPVILRFLA EQRKINFARG KPSPETIFGY EEPENNLELS KQIEEADEFY RSSNSIQVLL TTHSPAFYSV TKSQALASAW YAVRAAGSTS FQNSATTQSL DAGLGLMPFI EPYLHRAAND RAEMLEELNK LHSQSLHVDK AVICVVSDPP TTPTIRCGFR LSWHFR
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