| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3641 |
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| Symbol | |
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| ID | 1185306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4100364 |
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| End bp | 4100756 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394990 |
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| Product | endoribonuclease L-PSP family protein |
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| Protein accession | NP_793417 |
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| Protein GI | 28870798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.787877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGTG ATATCGAACT GATTCGCACC CCCTCGGCCG CAGCGCCGGG CGGGCACTAT
TCCCAGGCGG TGCTGCACCT AGGCATTTTG CATGTTTCCG GGCAATTGCC GGTGCGCGCC
GACGGCAGCC ACAGCGTTGA CGAGCCGTTC GAGGTGCAGG CGGCCATTGC GCTGGACAAT
CTGGTCGCGA TACTGGGCGC AGCAGGTTGT GGCACGGATG ACCTGCTCAA AGTGACGGTC
TATGTAGCCG GTATCCGGCA CTGGCCTGAT TTCGACCGGA TCTATGCGCG CTATCTGGGC
GAGCATCGTC CGGCCCGCGC TGTGGTGCCG GTTCCAGAAT TGCATCACGG CTACCTGATC
GAGATCGAAG CCCTGGCGCG CGCCGTACGA TGA
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| Protein sequence | MAGDIELIRT PSAAAPGGHY SQAVLHLGIL HVSGQLPVRA DGSHSVDEPF EVQAAIALDN
LVAILGAAGC GTDDLLKVTV YVAGIRHWPD FDRIYARYLG EHRPARAVVP VPELHHGYLI
EIEALARAVR
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