| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3609 |
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| Symbol | |
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| ID | 1185274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4068085 |
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| End bp | 4069107 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637394961 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_793388 |
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| Protein GI | 28870769 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.608868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACTCA GGGGAGAGAT TGGCTCAAGG AGGTCATGGG AAAGTACAGG CCGGGCTCTT
TACGATTACT TCAGCTTTCT CCAGGCGCAT AGTCTCCACT GGAAGGACGT TGATCGTGGC
GAGAAAAAGG ATCTTGTCAC CGGTTATAGG GATTACTGCC GGGATACATG CAGCCTTGCC
ACCTCAACGA TACGGCAACG CGTGAGATAT GTTTGTGAGT TTTACGACTT CTCATTAAAA
AACAAATGGA CTGAGAAGTT ACCTTACAAT GAAGTTTCGC GAGAGGTAAA ATCCCGTTCT
TTCAACTCTA GTCGTCATCC AATAGCGTCG AAAACAGTGC TCGTTAAAGA CGTGCTGCCG
GTGCTAACCA AGAGTCTGCC ACGCTTCCTC AGAATGAGTG AAGTTAAAGA ACTTCTGACA
CACGCCCAGA ACCCCCACCA TCGCATGATG ATTCGGTTCG CTCTACATAC AGGGATGCGC
CAAGACGAGA TCGCGTCGTT TCCCACTGCA TACGTGTTTA ACCCAGAAAA AGGGAAAAAC
ACTTCACGCA ACATTCAAAT CCGCCTCGAC CCTCGTGATG GAACAGGCAT GCGTACCAAG
AGAAGCAAGA TGCGGGACAT CTTCATCAGC AGACGATTCA TGCTAGAACT CCATGCGTAC
CTGACGAAGA TGCGTGGAGA ACGATCCACA CTGGCGAATT CCAATGCTAA GGAGCTTTTT
CTGAATCACA GAGGCGAGCC TTATGCAGAT TTCGGTAAAA GCATATGCCG AACAATACGC
AATATCGGCA AGAAAGTCAG CATAGTCGTA AGCACGCATA TGCTACGCCA TACCTATGCT
ACGCAAACGC TTTTATCGCT ACAGAAAAAC AGCGAAATCG AGCCTCTGGT TTTCTTGCAA
AGACAGCTCG GTCACAGCTC GATTCAAACT ACAATGGTTT ACTTGCATCT AGTCAACGCC
TTAGCCGATG AAGCAGTTCT TGCGTATGAC GACGAGTTAG CAAATCTTAG TGAGGTTGCA
TGA
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| Protein sequence | MTLRGEIGSR RSWESTGRAL YDYFSFLQAH SLHWKDVDRG EKKDLVTGYR DYCRDTCSLA
TSTIRQRVRY VCEFYDFSLK NKWTEKLPYN EVSREVKSRS FNSSRHPIAS KTVLVKDVLP
VLTKSLPRFL RMSEVKELLT HAQNPHHRMM IRFALHTGMR QDEIASFPTA YVFNPEKGKN
TSRNIQIRLD PRDGTGMRTK RSKMRDIFIS RRFMLELHAY LTKMRGERST LANSNAKELF
LNHRGEPYAD FGKSICRTIR NIGKKVSIVV STHMLRHTYA TQTLLSLQKN SEIEPLVFLQ
RQLGHSSIQT TMVYLHLVNA LADEAVLAYD DELANLSEVA
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