Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3536 |
Symbol | |
ID | 1185201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3991961 |
End bp | 3993061 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394889 |
Product | glycosyl transferase, group 1 family protein PslI |
Protein accession | NP_793316 |
Protein GI | 28870697 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.717372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATAG GACTCGACTA CCGCGCGGCT GCCGGTTATC CCGTCAGCGG CATTGGCCGG CAGAACTTCG CGCTGGAAAA AGCCTTCCGC GAACACCCGG ACGTGCAACT GCAATTGTTC GGTGTAGCAC CTTACGACCA TCCGGTGCGC CGCCTGATTC ATACCCCGCG CTGGGCAGCG CCACTGGACT CGGTGCATCG TCTGCCCGAC CGCCTGCGCT TCGAAGGCGC ATTTCTGCCC GGTGCATTGC GCGACGCAGG GGTCGATATC TACGTGGCGA ATATCAACAT GGGCCTGCCG CTGGGCCGCA AACCGGCGGG CATGCGCTAC GTGCTGCAAT TGCATGACCT GTTTCAGCTC ACCGAGCAGA ACAATCATGG CTCACGGCTT AAAGCGCGGG TCTACCGCTT TACCGACTAC GCGTCGATAG CCTGGTCGCT CAAGGTCGCC GATCAAATCT GGGTGCCCTC ACAATTTACC GCCGACGAGG CCGCACGCCT GTTTCCCGCC ATCAGAGATA AACTGCGCGT CGTGCCATTG CTGGTCGAGC GCTTCCAGGG CGAGCCGGCC GATATCACTC AGTTGCGTCT GCCTCAGCGT TACTGGCTGT GCGTGGGCAC GCGCGAGCCG CGCAAGAACA TCAAATGGTT CGTCGATGCC TGGCAGACCG CGCGCATGCA GTTTGTCGAG ACCCCGGAGC TGGTGCTGGT CGGCGGCGAC GAGCCGTTGA CCGAAGCCCA GCGTCAGTTG CCCGGGCTGC ATGTGCTGAG CGGCCTCAGC GATGCCGAGC TACACGCGGT CTACAAGCAT GCCGAGCGGC TCTGGCAGCC GTCCAGACGC GAAGGGTTCG GCTTGCCGGT GATTGAGGCG CTGAACGTCG GCACACCGGT TGCCGTGGCT ACCGGCTCGT CGCTGAATGA AGTCGCCCCG CCCGACAGCC CACGCTTTTC GCCTGACGAC AGCGGCAACC TCATCAGGCT GATGGGCAGC CTTTCGCAGG CGCCTGAAGA AGACCCGGCT ATCGCCAGAG ACTGGACTGA ACGCTATCAG TTGAAAGCCT TTTGCGAACG CGTGCACGCT GCGCTGGAGG AACTGCGCTG A
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Protein sequence | MRIGLDYRAA AGYPVSGIGR QNFALEKAFR EHPDVQLQLF GVAPYDHPVR RLIHTPRWAA PLDSVHRLPD RLRFEGAFLP GALRDAGVDI YVANINMGLP LGRKPAGMRY VLQLHDLFQL TEQNNHGSRL KARVYRFTDY ASIAWSLKVA DQIWVPSQFT ADEAARLFPA IRDKLRVVPL LVERFQGEPA DITQLRLPQR YWLCVGTREP RKNIKWFVDA WQTARMQFVE TPELVLVGGD EPLTEAQRQL PGLHVLSGLS DAELHAVYKH AERLWQPSRR EGFGLPVIEA LNVGTPVAVA TGSSLNEVAP PDSPRFSPDD SGNLIRLMGS LSQAPEEDPA IARDWTERYQ LKAFCERVHA ALEELR
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