| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3500 |
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| Symbol | |
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| ID | 1185165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3951574 |
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| End bp | 3953511 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394853 |
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| Product | iolC protein |
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| Protein accession | NP_793280 |
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| Protein GI | 28870661 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.782212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCAGA CACGCTTTGC CACTGGGCGT CAGTTGGATC TGATTTGCCT CGGACGCCTG
GGCGTCGATC TCTATGCGCA GCAGGTCGGC GCACGACTTG AAGACGTTTC CAGTTTCGCC
AAATACCTCG GTGGCTCATC GGCCAATATC GCCTTCGGCA CCGCCAGGCT GGGTCTCAGG
TCGGCGATGC TCAGCCGGGT GGGCGACGAC CACATGGGGC GTTTTCTGCT CGAGTCGCTG
GCTCGCGAAG GCTGTGACGT CAGCGCCGTC AAGCGCGATC CCGAACGCCT GACCGCCATG
GTGCTGCTGG GCCTGAAGGA TCGCGAAACA TTCCCGTTGG TGTTCTACCG CGAAAACTGC
GCAGACATGG CCCTGCGCGC CGAAGACATC GACGAACAGC ACATCGCATC CAGTAAGGCG
CTGCTGATCA CCGGTACGCA TTTCTCGACG GACCAGGTGT TCAAGGCCAG CAGCCAGGCG
CTGGATTATG CCGAAAAGCA CAACGTCAAA CGGGTGCTGG ATATCGACTA TCGGCCGGTG
CTTTGGGGCC TGGCCGGAAA GGCGGATGGC GAAACGCGGT TCGTTGCCGA CCAGAAGGTC
AGCCAGCATG TGCAGCGCAT TCTGCCGCGT TTCGACCTTA TCGTCGGCAC TGAAGAAGAA
TTCCTGATTG CCGGTGGCTC GACCGATTTG CTCGGCGCAC TACGCACCGT GCGTGAACTG
ACCGCCGCAA CGCTGGTGGT CAAGCTCGGG CCGCAAGGCT GCACGGTGAT TCATGGTGCC
ATCCCGGCGC GCCTGGAAGA CGGAGCGATC TACCCCGGCG TGCGGGTCGA GGTGCTCAAC
GTGCTGGGCG CCGGTGATGC GTTCATGTCC GGTTTCCTCA GCGGCTGGCT CACGGAGGCC
AGCGACGAAC GTTGCTGCCA GTTGGCCAAT GCCTGTGGCG GGCTGGTGGT GTCGCGCCAT
GCCTGCGCGC CGGCCATGCC GACGCCTGCC GAACTCGACT ACCTGTTCAA CAGCCCGGAG
CCGATCACCC GGCCGGATCA GGACGTGATA TTGCAGCGCC TGCATCAGGT CAGCGTACCG
CGCAAACAAT GGAAACAACT GTTCATCTTC GCCTTCGATC ATCGCGGGCA ACTGGTCGAA
CTGGCCCAGC AGGCCGGACG CGATCTCAAC AGCATCAGCC AGCTCAAACA GTTGTTTGTA
CAAGCGGTCG AGCGTGTCGA GGCGGACCTG CACCAACGCG GCATCGAGGC TGATGTGGGT
CTGTTGGCAG ATCAGCGTTT CGGTCAGGAT TCGCTCAACA CGGCCACTGG TCGCGGCTGG
TGGCTTGCGC GTCCCGTGGA GGTGCAAGGT TCAAGGCCTT TGGCGTTCGA GCATGGGCGC
TCCATTGGCA GCAATCTGAT CAACTGGCCG CAAGAGCAGA TCGTCAAGTG TTTGGTGCAA
TATCACCCAG ACGACGAACC GATGCTGCGT CTGGAGCAGG AGGCGCAAAT CAAGGCGCTG
TATGACGCCT CGAAAGTCAG CGGTCACGAG TTGCTGCTGG AGATCATCCC GCCCAAGGAT
CATCCATCGG CTCATCCGGA CGTCATGCTG CGTGCCTTGA AGCGCCTGTA CAACCTGGGT
ATCTATCCGG CGTGGTGGAA AATCGAAGCG CAGAGCACAG AGGTCTGGCA GCAACTGGAC
GAGCTGATTC AGCAACGCGA TCCTTACTGT CGTGGTGTGG TGCTGCTCGG GCTCAATGCG
CCGGTCGAAG AACTCGCTGC CGGGTTTGCA CAGGCGCGCG ACAGCCATGT GTGCAAGGGT
TTTGCAGTCG GCCGGACGAT CTTTCGAGAG CCAAGCCGGG CCTGGATGGC CGGCGAGATC
GACGATGCGA CGCTGGTCAG CCAGGTGCAG AGCACGTTCA GCGGGTTGAT CGAGTCGTGG
CGCGAAAGCC GCGCCTGA
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| Protein sequence | MGQTRFATGR QLDLICLGRL GVDLYAQQVG ARLEDVSSFA KYLGGSSANI AFGTARLGLR
SAMLSRVGDD HMGRFLLESL AREGCDVSAV KRDPERLTAM VLLGLKDRET FPLVFYRENC
ADMALRAEDI DEQHIASSKA LLITGTHFST DQVFKASSQA LDYAEKHNVK RVLDIDYRPV
LWGLAGKADG ETRFVADQKV SQHVQRILPR FDLIVGTEEE FLIAGGSTDL LGALRTVREL
TAATLVVKLG PQGCTVIHGA IPARLEDGAI YPGVRVEVLN VLGAGDAFMS GFLSGWLTEA
SDERCCQLAN ACGGLVVSRH ACAPAMPTPA ELDYLFNSPE PITRPDQDVI LQRLHQVSVP
RKQWKQLFIF AFDHRGQLVE LAQQAGRDLN SISQLKQLFV QAVERVEADL HQRGIEADVG
LLADQRFGQD SLNTATGRGW WLARPVEVQG SRPLAFEHGR SIGSNLINWP QEQIVKCLVQ
YHPDDEPMLR LEQEAQIKAL YDASKVSGHE LLLEIIPPKD HPSAHPDVML RALKRLYNLG
IYPAWWKIEA QSTEVWQQLD ELIQQRDPYC RGVVLLGLNA PVEELAAGFA QARDSHVCKG
FAVGRTIFRE PSRAWMAGEI DDATLVSQVQ STFSGLIESW RESRA
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