| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3493 |
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| Symbol | |
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| ID | 1185158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3943355 |
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| End bp | 3944215 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394846 |
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| Product | iolH protein |
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| Protein accession | NP_793273 |
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| Protein GI | 28870654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00667421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTG CACTGGACCC TTACATGTAT CGCCATCTGT CCCTCGGGGC GATGGTCGAT
AAAACCGCGG AACTGGGCTA CGACTACATC GAGCTGTCGC CGCGTGAAGA CTTCATGCCG
TTTTACAAGT ATCCACGCGT GGACCGGGCG CGGATCAGAG AGTTTCGCAA GGCCCTGAGC
GACGCGGGCG TGAAGCTCTC CTCGCTGCTG CCGCTGTACC ACTGGGCCGC GCCCGATGAA
GACCTGCGCA TTGCCGCCGT GCGCAACTGG AAGCGTGCCA TTGAGGTGGC GGTGGAAATG
GACTGTGACC TGATGAATAC CGAGTTCAGC GGGCAATCCG ATCATGCGCT GGTCTGCGAG
AACCAGTTCA TGAAGTCGAT GGACGAACTG ATGCCGCATT TCGAGCGCGA AGGCATAAAG
CTGGATATTC AGGCACATCC CTATGATTTC TGTGAGCGCA ATAACGAATC GGTAGACATC
ATTCGCGGGC TCGATCGCGA CTGGATCAAC TACCTGTACG CTGCGCCCCA CACTTTTTTC
TACGATGATG GCGTGGGGGA TATCGCCTCC ATGCTGCGCT ACGCAGGCGA CAGGCTCACG
CACCTGATCA TTGCCGACAC CTATAATCAT CGGGCTTCGT CCAACCTGCG CTACATCGTC
AACCCGCCTG GCGTGACGGC GACCGTGCAT CAGCACCTGG ACATCGGCCA GGGCGAGGTG
AACTGGGAAG CGTTTTTCTC GACACTCAGG GACATCAAGT TCGACGGTAT CGCCACGGTG
GCTGTATTTG CCTGGGAAGA GCGCGCCGAT GAGTCGAGCC GATTCATGCT CGAACGGGTC
AAAAGTGAGC TGCTGCGCTG A
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| Protein sequence | MRIALDPYMY RHLSLGAMVD KTAELGYDYI ELSPREDFMP FYKYPRVDRA RIREFRKALS
DAGVKLSSLL PLYHWAAPDE DLRIAAVRNW KRAIEVAVEM DCDLMNTEFS GQSDHALVCE
NQFMKSMDEL MPHFEREGIK LDIQAHPYDF CERNNESVDI IRGLDRDWIN YLYAAPHTFF
YDDGVGDIAS MLRYAGDRLT HLIIADTYNH RASSNLRYIV NPPGVTATVH QHLDIGQGEV
NWEAFFSTLR DIKFDGIATV AVFAWEERAD ESSRFMLERV KSELLR
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