| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3492 |
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| Symbol | |
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| ID | 1185157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3942270 |
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| End bp | 3943289 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394845 |
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| Product | oxidoreductase, Gfo/Idh/MocA family |
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| Protein accession | NP_793272 |
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| Protein GI | 28870653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00854332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGCAG GGCTGGTGGG CTACGGCAAA GGGGGGCGTT ACTTTCATGC GACGCTGATT
TCAAGTGTGC CCGGTGCCAC GTTTGCGGGC GTGGTGACCC GTTCGCCTGA ACGAAAGCAG
GACGTCGCCA ATGATTATCC CGGCGTTGCG ACGTTCGACA CGCTGGCCGA ACTGGTGGCT
GCCGGGGTCG ATGTGGTGGT GATTTCCACA CCGCTGGCAT CACGGCGAGC GTTGATTCTG
GAGGCTATCG AACTGGGCGT GGCGGTGGTC AGCGATAAAC CCTTTGCCAA TGATGCCGCG
CAGGCGCGTG AACTGGTGGA GGCTGCCGAG CGGCGCGGGG TGCTGCTCAG TGTTTATCAG
AACCGGCGCT GGGATTCTGA CTTCCTCACC GTGCGTAAAC TGATCGACAA CGATGCGTTG
GGCGAAATCA GCCGCTTCGA GTCCAGCATC GAGCGCTATT CGCCGCGCTC CGTCGGCAAG
GCCAGCGGTG GGGGCATGTT GCGCGACCTG GGCAGTCACC TCGTGGATCA GGCGCTGGTG
CTGTTCGGAC CGGTCGAGCG GGTGTACGGC GAATTGCGCT TCGCCGCCGC CGACGAAGAG
CTTGATCACA CGTTTTTCGT CGCGCTGACC CATGCCAATG GCGTGGTCTC GCATTTGTCC
GGCAGTTGCC TGCAAAACAC CCCCAAGCCG CGCTTCCGAG TCAGTGGCCC GAAGGGGTGT
TACAGCGTCG ACGGGCTGGA CGGTCAGGAA GAAGCGGCGT TTGCCGGCCT GACTCCACGG
TCCGAAGGCG AGCGCTGGGG CGTCGAAGAG CATCGGCGCT GGGGCTGGTT CGAGCAGGGC
GATCATCGCG AACGCGTGCC CTCGGAGCGG GGCTGCTGGC TTGAGTTCTA CCAGCAACTG
CAACGTGCAG TGGACGAGCA GGGCAGCAAC CCGGTCAACC CCCACGATGC AATCGCCTCG
GCGCAGGTCA TGGACGCAGC ACGCCTGAGC GCCCGCGAAG GACGGATTGT GGTGCTGTAG
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| Protein sequence | MRAGLVGYGK GGRYFHATLI SSVPGATFAG VVTRSPERKQ DVANDYPGVA TFDTLAELVA
AGVDVVVIST PLASRRALIL EAIELGVAVV SDKPFANDAA QARELVEAAE RRGVLLSVYQ
NRRWDSDFLT VRKLIDNDAL GEISRFESSI ERYSPRSVGK ASGGGMLRDL GSHLVDQALV
LFGPVERVYG ELRFAAADEE LDHTFFVALT HANGVVSHLS GSCLQNTPKP RFRVSGPKGC
YSVDGLDGQE EAAFAGLTPR SEGERWGVEE HRRWGWFEQG DHRERVPSER GCWLEFYQQL
QRAVDEQGSN PVNPHDAIAS AQVMDAARLS AREGRIVVL
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