Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3474 |
Symbol | |
ID | 1185139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3922872 |
End bp | 3923360 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394827 |
Product | potassium efflux system protein PhaE, putative |
Protein accession | NP_793254 |
Protein GI | 28870635 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTC TGTTTCCCGC CCCGCTCTTC TCGCTGGCGC TGTGGGCGCT GTGGCTGGTA CTGAACCTGT CGCTCAGCCC CGGCCATTTG CTGCTGGGTG CCATTCTCGG CTTTCTGGCG CCAGTGCTGA TGGCCCCCTT GCGGCCGCTG CCGGTACGCA TACGCAAACC GGGTACGATC CTCAGGTTTT TATGCAGAGT AGGCGTCGAT GTGGTGGTGT CCAACCTGCA GGTCGGTTTG AGCGTATGGC GACTCAAGCA GCGCCCGCCG CGCTCGGCCT TTGTGCTGGT GCCACTTGAA TTACACGATG CCCACGGCCT TGCCGCGCTG GCGATGGTCA CCACGGTAGT GCCCGGCACG GTTTGGTCCG AGCTGGCACT GGATCGCAGC GTGCTGCTGA TGCACGTGTT CGATCTGGAA GACGAGGCGC AGTTCATCGA GCACTTCAAG ACCACTTATG AGCGTCCATT GATGGAGATC TTTCAATGA
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Protein sequence | MKRLFPAPLF SLALWALWLV LNLSLSPGHL LLGAILGFLA PVLMAPLRPL PVRIRKPGTI LRFLCRVGVD VVVSNLQVGL SVWRLKQRPP RSAFVLVPLE LHDAHGLAAL AMVTTVVPGT VWSELALDRS VLLMHVFDLE DEAQFIEHFK TTYERPLMEI FQ
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