Gene PSPTO_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3474 
Symbol 
ID1185139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3922872 
End bp3923360 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID637394827 
Productpotassium efflux system protein PhaE, putative 
Protein accessionNP_793254 
Protein GI28870635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTC TGTTTCCCGC CCCGCTCTTC TCGCTGGCGC TGTGGGCGCT GTGGCTGGTA 
CTGAACCTGT CGCTCAGCCC CGGCCATTTG CTGCTGGGTG CCATTCTCGG CTTTCTGGCG
CCAGTGCTGA TGGCCCCCTT GCGGCCGCTG CCGGTACGCA TACGCAAACC GGGTACGATC
CTCAGGTTTT TATGCAGAGT AGGCGTCGAT GTGGTGGTGT CCAACCTGCA GGTCGGTTTG
AGCGTATGGC GACTCAAGCA GCGCCCGCCG CGCTCGGCCT TTGTGCTGGT GCCACTTGAA
TTACACGATG CCCACGGCCT TGCCGCGCTG GCGATGGTCA CCACGGTAGT GCCCGGCACG
GTTTGGTCCG AGCTGGCACT GGATCGCAGC GTGCTGCTGA TGCACGTGTT CGATCTGGAA
GACGAGGCGC AGTTCATCGA GCACTTCAAG ACCACTTATG AGCGTCCATT GATGGAGATC
TTTCAATGA
 
Protein sequence
MKRLFPAPLF SLALWALWLV LNLSLSPGHL LLGAILGFLA PVLMAPLRPL PVRIRKPGTI 
LRFLCRVGVD VVVSNLQVGL SVWRLKQRPP RSAFVLVPLE LHDAHGLAAL AMVTTVVPGT
VWSELALDRS VLLMHVFDLE DEAQFIEHFK TTYERPLMEI FQ