| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3455 |
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| Symbol | |
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| ID | 1185120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3897610 |
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| End bp | 3898311 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394808 |
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| Product | 3-oxoacid CoA-transferase, subunit A family |
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| Protein accession | NP_793235 |
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| Protein GI | 28870616 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGAC TCGACAAACG AGTAGCGACC TACGAAGAAG CCCTCGCCGG GCTCACCGAC
AACATGACGG TGCTCTGCGG CGGCTTTGGC CTGTGCGGCA TTCCTGAAAA CCTGATAGCG
CAGATCAAGC GCATGGGCAT CAAGGGCCTG ACCGTCGTTT CCAACAATTG TGGTGTCGAC
GGTTTCGGGC TGGGCATCCT GCTGGAGGAC CGACAGATCC GCAAAATGAT TTCATCCTAT
GTCGGTGAAA ACGCCTTGTT CGAAAAACAG TTGCTCAGCG GCGAGCTGCA AGTCGAGCTC
ACTCCGCAAG GCACACTGGC TGAAAAACTG CGCGCAGGTG GTGCGGGCAT TCCTGCGTTC
TATACCGCTA CCGGCTACGG AACACCGGTG GCCGAGGGCA AGGAAACTCG CCAGTTCAAT
GGCCGCAACG TCATTCTGGA AGAGGCCATC ACTGGCGACT TTGCGCTCAT CAAGGGCTGG
AAAGCCGACC ATTTCGGCAA CGTGATCTAT CGTCATACCG CACAGAACTT CAATCCGGTA
GTAGCCACCG CTGGACGGAT AACCGTGGTC GAGGTCGAAG AAATCGTTGA GCCGGGCGTA
TTGCTGCCTA CCGAGATCCA CACGCCAGGC ATTTACGTCG ACCGCGTGAT TCAGGGCACC
TTCGAGAAGC GCATCGAACA GCGCACCGTC AGAAAATCCT GA
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| Protein sequence | MAGLDKRVAT YEEALAGLTD NMTVLCGGFG LCGIPENLIA QIKRMGIKGL TVVSNNCGVD
GFGLGILLED RQIRKMISSY VGENALFEKQ LLSGELQVEL TPQGTLAEKL RAGGAGIPAF
YTATGYGTPV AEGKETRQFN GRNVILEEAI TGDFALIKGW KADHFGNVIY RHTAQNFNPV
VATAGRITVV EVEEIVEPGV LLPTEIHTPG IYVDRVIQGT FEKRIEQRTV RKS
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