Gene PSPTO_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3404 
Symbol 
ID1185064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3844095 
End bp3844622 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content60% 
IMG OID637394755 
Producthypothetical protein 
Protein accessionNP_793187 
Protein GI28870568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGATG AAGTTTTCAA TCTTGACTCA CTGTACGAAG CCATTGAACA ACACATCAGG 
GCCTCGATTG CCGGGCTTGA ATATGTCGGC ACCATGCCGG ATATGCTTCA GCAAGTCGCC
GTCCCGGCTG TGTTGATCGA ACTGGTGGAG TTTGAGCCAG GCATTGATCA GGGCACAGGA
GAAACGGCCT TGATTGCCCG GTTTGAAGCA CGGGTGATCG TGGGGTCCGA GCGCGAGCAT
TGCCAGCAGC AGGCAGCCTT TGCGGCCTCG CAACTGGCTG TTCTGCTGAG GTTGCAGACC
TGGGGGCTTG AGGTCGAGCC CGCCGAGTTC GTCAGAGCCG CACAGGACTG GTCGAGGCCG
GAACTGGACG GTTATGCGGT CTGGGTGGTC GAGTGGACCC AAGGCATCTA CCTCGGCGAA
GAGGAATGGC CTTGGCCAAA TGAGCCGCCC GGCACTCTGG TGTTCGCGTT CAGTCCCGAC
ACCGGGCGTG ACAACGAAGG CCAGTATCAG TCGCCCGAGG ACATGTGA
 
Protein sequence
MPDEVFNLDS LYEAIEQHIR ASIAGLEYVG TMPDMLQQVA VPAVLIELVE FEPGIDQGTG 
ETALIARFEA RVIVGSEREH CQQQAAFAAS QLAVLLRLQT WGLEVEPAEF VRAAQDWSRP
ELDGYAVWVV EWTQGIYLGE EEWPWPNEPP GTLVFAFSPD TGRDNEGQYQ SPEDM