Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3404 |
Symbol | |
ID | 1185064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3844095 |
End bp | 3844622 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394755 |
Product | hypothetical protein |
Protein accession | NP_793187 |
Protein GI | 28870568 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGATG AAGTTTTCAA TCTTGACTCA CTGTACGAAG CCATTGAACA ACACATCAGG GCCTCGATTG CCGGGCTTGA ATATGTCGGC ACCATGCCGG ATATGCTTCA GCAAGTCGCC GTCCCGGCTG TGTTGATCGA ACTGGTGGAG TTTGAGCCAG GCATTGATCA GGGCACAGGA GAAACGGCCT TGATTGCCCG GTTTGAAGCA CGGGTGATCG TGGGGTCCGA GCGCGAGCAT TGCCAGCAGC AGGCAGCCTT TGCGGCCTCG CAACTGGCTG TTCTGCTGAG GTTGCAGACC TGGGGGCTTG AGGTCGAGCC CGCCGAGTTC GTCAGAGCCG CACAGGACTG GTCGAGGCCG GAACTGGACG GTTATGCGGT CTGGGTGGTC GAGTGGACCC AAGGCATCTA CCTCGGCGAA GAGGAATGGC CTTGGCCAAA TGAGCCGCCC GGCACTCTGG TGTTCGCGTT CAGTCCCGAC ACCGGGCGTG ACAACGAAGG CCAGTATCAG TCGCCCGAGG ACATGTGA
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Protein sequence | MPDEVFNLDS LYEAIEQHIR ASIAGLEYVG TMPDMLQQVA VPAVLIELVE FEPGIDQGTG ETALIARFEA RVIVGSEREH CQQQAAFAAS QLAVLLRLQT WGLEVEPAEF VRAAQDWSRP ELDGYAVWVV EWTQGIYLGE EEWPWPNEPP GTLVFAFSPD TGRDNEGQYQ SPEDM
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