| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3322 |
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| Symbol | |
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| ID | 1184980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3756009 |
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| End bp | 3756899 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394672 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793105 |
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| Protein GI | 28870486 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0151906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGAC TCAACCTCAA TCACCTGCAC ACGTTCTCGC TGGTCGTCGC GCATGGCAGC
TTTTCCGCAG CCGCAGAGCA CCTGCACCTG ACCCAACCAG CGGTCAGTCT GCAGGTGCGC
CAGCTGGAAA CCCGCTTGAA CCTGAAACTG ATCGAGCGCG TGGGTAAACG CCTCAAGCCC
ACCTCGGCGG GCAACACACT GCTGGAACAT ATCGCGCGCA TTGACGCCGT GGTCGAGGAC
GCCCTGCTGG AGCTGTCCAG TCACGCCAGC GGTGTTGCCG GGCAAGTGGC CATCGGCACC
GGCGCGACGG CCTGCATTCA TCTGCTGCCG CCCATGTTGC AAGCGCTGCG TCGGCGCTTT
CCCGAGCTGG AGGTGCGGGT CAGCACCGGC AACACCGACA GCATTATCAA GGCCGTAGAA
GAAAACCGCC TTGACCTTGC GCTGGTCACC CTGCCCGCCG GCGGCCGCAG CTTGCACATC
AAGCCATTGC TTGAAGACGC CTTCGTGGCG ATTTTCGCCA ACAGCCAGCA ACCGATGCCC
GTGGACATGA CGCCCGAGCA CCTCAGCGAA CTGCCGCTGG TGGTGTTCGA GGCCGGGAGC
AGCACGCGCC TGCTAATCAA TGAGTGGTTC TCGCAGGCCG GGATTCGCAT CAAGCCGGTG
ATGGAACTGG GCAGCATCGA GGCAATCAAG GAAATGGTCG CTGCGGGGCT GGGCTACAGC
ATCGTGCCGC GCATGGCCGT TGCCGCGCCG CACCATCGGC GCGGCTTGTA TGTTCAGGCT
CTGGCACCGG GGCTGAGCCG TACGCTGGGC ATTGCGTTAC GGCAGGACAA GCCGGTCAAC
AACGCGCTGC GCCAGGTGCT GGATGCGCTG CAGCACCTCA AAGGGTCATG A
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| Protein sequence | MQRLNLNHLH TFSLVVAHGS FSAAAEHLHL TQPAVSLQVR QLETRLNLKL IERVGKRLKP
TSAGNTLLEH IARIDAVVED ALLELSSHAS GVAGQVAIGT GATACIHLLP PMLQALRRRF
PELEVRVSTG NTDSIIKAVE ENRLDLALVT LPAGGRSLHI KPLLEDAFVA IFANSQQPMP
VDMTPEHLSE LPLVVFEAGS STRLLINEWF SQAGIRIKPV MELGSIEAIK EMVAAGLGYS
IVPRMAVAAP HHRRGLYVQA LAPGLSRTLG IALRQDKPVN NALRQVLDAL QHLKGS
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