Gene PSPTO_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3253 
Symbol 
ID1184911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3677263 
End bp3677985 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID637394604 
Producthypothetical protein 
Protein accessionNP_793037 
Protein GI28870418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.317788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CACTCGCTCT GCTCGCTTTT GCCACCCTGC TGCCCAGTGC ATGGACCCAT 
GCCGACAGCG CCTACATCAA CTACCGCCAC CAATACGCGG AAAGCACGCG CATGCATGCC 
GACCGGGTCA AATTCGGCAG CCGCCTGGAC AGCGGCTGGG GCTTTGAAGG CGAGCTTAAA 
TACAAGACCG CAGGCGACCG ACAGGACGTT GCATTCGACA ACACCGTCGG TAACGGCCAC 
GAACTGACGA CCAGCTATCA ATATCGGCTC AATGACAAAT GGATGCTCAC CCCGTCACTG 
GCACTGGAAA GCATCGAGAA GTCCACGGCC TATAAAATGG GCCTCAAGCT GGGTTACAAA 
GTGAATGACC AGTTGAGCGT CTCGGGCCGC TATCGCTACG ACTCGATCAA ACTTGACCGC 
GACAAGGTCA ACCACGACAT GCCTGACAAC CAGATGGACG ATCAGTCGAT CAATCGTTAC 
GACGTCTGGG TCAATTACGC CAGCAAAGGC CCCTGGGCTT ATGAGTATCA GTTCACCTAC 
TTCGACGCCG ATTACATCCG TTACGACAAT GGCAGGACCG ACTACGAACA GAACGCGGCC 
TTCAAATACA GGTGGGACAA GCACTGGGTG CCGTTCTTTG AGGTGGGCGA CATCAAGGTG 
GACTCGGAAG ACGACAAGCG CCAGCTGAGA TTAAGGGTGG GGGTGCAGTA CAACTTCTTA 
TAG
 
Protein sequence
MKKSLALLAF ATLLPSAWTH ADSAYINYRH QYAESTRMHA DRVKFGSRLD SGWGFEGELK 
YKTAGDRQDV AFDNTVGNGH ELTTSYQYRL NDKWMLTPSL ALESIEKSTA YKMGLKLGYK 
VNDQLSVSGR YRYDSIKLDR DKVNHDMPDN QMDDQSINRY DVWVNYASKG PWAYEYQFTY 
FDADYIRYDN GRTDYEQNAA FKYRWDKHWV PFFEVGDIKV DSEDDKRQLR LRVGVQYNFL