| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3205 |
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| Symbol | |
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| ID | 1184862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3598222 |
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| End bp | 3599412 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394559 |
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| Product | dehydrogenase, isocitrate/isopropylmalate family |
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| Protein accession | NP_792993 |
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| Protein GI | 28870374 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0643665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGC AAGTACTTCG CAAACGCATT TGCGTGCTGC CCGGCGACGG TATTGGTGTT
GAAGTCATGG AGGCTGCCTT GCCGGTGATC GCTGCGCTGG GCCTGCCTTT TGACCTGCTG
CACGCCGACA TCGGCTGGGA ATGCTGGAGG CGCGAAGGCG AAACCGTTCC GGACGACACC
TGGAAGGTTA TGGCCAGCTG TGATGCGACG CTGCTGGGCG CGATCACCAG CAAGCCTCTG
GCGGAAGCCG AGGCCGAACT GCCGCTGCCA CTTCAGGGCC ACAGCCGCCG GTATGTCAGC
CCGGTCATTC AGCTCAGGCA GAATCTTGAC CTGTACGCCA ATGTTCGCCC GGTGACCGAC
ATGACCGGCG AAAACAGATT TCGCTTTGTG GTGATCAGAG AAAACACCGA AGGCCTTTAT
GCTGGGCTGG ACTTTGGGCG TATTCCGGAC GCGCTCGTGC CCTTGCTTGA AGCGCGCGAA
GCACTGGGCG CTGCCTGGCA AAGAGCCGGG CAGGAGGATG CGACCGTTAC CCTGCGCTTG
CAGACGCGCA GCGGCTTGAC GCGTATTTTC GAATACGCTT TTGACTATGC ACGGAATAAC
AATTTCTCTC GCGTAACGTT TGTCGACAAG CCGATGGTGC TTCGCCACAG CAGCGCTTTT
GCCCGGGTGA TTTTCGAAGA AACAGCGCAG CGCTACCCGG ATATAACCGG CGCTATCGAG
AATGTCGATG CCGTTGCCCT GTGGATGGTT CAACGACCCG AGCGCTTTGG CGTGATTGTT
GCCGAGAACA TGTTCGGTGA CATCCTCTCG GATCTGGGGG CCGGTGTGAT GGGAGGGCTC
GGGTTTGCGC CCAGCGGCAA CTTTGGCAAC TCCGGTGCTT ACTTCGAGCC GGTACATGGC
AGCGCACCCG CCCATGCGGG GCTGACTAAA GCCAACCCGA GCGCGATGTT TCTGGCCATT
GCCATGATGC TGGAACACTT GGGTTATCCG GCCCAATCGG ATTGCATTAC CCGTGCGGTC
AGTCTGGTCG CTCGCTCGGC GGTGCGCACT TATGACCTGG GCGGTTCTCA TACCACTTGC
CAGGTGGGCG AGGCCATTGT TCAACAGTGT GTGGAGTTGC AGGGGCTGTT GGTTGACCGC
CGTGAGCGTT CCCGGTCTGC TCAAGGAGAA CGCCATGTCA GTGCCCTTTG A
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| Protein sequence | MSAQVLRKRI CVLPGDGIGV EVMEAALPVI AALGLPFDLL HADIGWECWR REGETVPDDT
WKVMASCDAT LLGAITSKPL AEAEAELPLP LQGHSRRYVS PVIQLRQNLD LYANVRPVTD
MTGENRFRFV VIRENTEGLY AGLDFGRIPD ALVPLLEARE ALGAAWQRAG QEDATVTLRL
QTRSGLTRIF EYAFDYARNN NFSRVTFVDK PMVLRHSSAF ARVIFEETAQ RYPDITGAIE
NVDAVALWMV QRPERFGVIV AENMFGDILS DLGAGVMGGL GFAPSGNFGN SGAYFEPVHG
SAPAHAGLTK ANPSAMFLAI AMMLEHLGYP AQSDCITRAV SLVARSAVRT YDLGGSHTTC
QVGEAIVQQC VELQGLLVDR RERSRSAQGE RHVSAL
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