| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3198 |
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| Symbol | |
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| ID | 1184855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3591973 |
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| End bp | 3592959 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394552 |
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| Product | bacterial luciferase family protein |
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| Protein accession | NP_792986 |
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| Protein GI | 28870367 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.339171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGG ACAAGCCACT CAACCTGCAC AAATCGGGGG CGCACTCGGC GTTTTCGAAG
GTTTTCGCAC CCGGCCATCT TACCTTTGGA CTGATTGCGC CGCTGGAGGG TTATCCGAAC
TCGGCAGTGC CGACCATGGA CGACCATATC GCACTTGCGG TACAGGCAGA CAAGGCGGGT
TTTGCCGCCC TGTGGCTACG CGATGTGCCC ATGCTCGATC CGGCGTTCGG CGACGCCGGG
CAGATCTTTG ACCCGTTCGT GTACGCCGGG CTGCTGGCGG GTGTCACCCA ACGAATATGT
ATCGGAACCG CGGGCATCGT CATGACACTG CGTCACCCGC TGACCGTGGC CAAACAGGCC
TGCAGTCTGG ACGTGCTGCT CAAGGGGCGC TTTTTGCTGG GGCTGTCTAC CGGTGACAGA
CCCAGTGAGT ATCCGGCGTT CGGGCAGGAT TTCGATACAC GAGCCGCACG TTTCAGAGAA
TGCGTCGAGA TTCTACGCGC AGTGACAGAA CACTCTTTTC CCCTGTTGAC CACGCAGCAC
TACGGGCAAT TGAACGGTGA GCTGGATCTT CTGCCCAAAC CCTGGAGCGG ACGACTGCCG
ATGCTGGCAG TCGGTCGCTG TGGCCAGGAT ATAAAGTGGC TGGCAAACCA CATGGACGGC
TGGATATGGC ACCAGAGCGG CTTCAATACA TTGCCTGAGG TCATCGACCA CTGGCGTGAA
TCCAACGTGC AGAAACGCTT CAAACCCTAC GGTTATGCGA CATTTTTTGA TCTAGACGAC
AACAAGGATG CCCCCATGAC CGTTGGGCGC GGCATCAGTA CAGGGCGAAA CGCGCTCATC
AGGTTGTGGG AGCGCCAACG AGAAGAAGGC GTCTCGCATG TGGCGTTGAA CCTGAAACCT
CTGAAGCGCC CCGCCAAGGA GGTGTTACAG GAGCTGGAAG AGTACGTATT GCCGTATTTT
CCTACACGCC GGGGTAATCC GGTCTGA
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| Protein sequence | MIQDKPLNLH KSGAHSAFSK VFAPGHLTFG LIAPLEGYPN SAVPTMDDHI ALAVQADKAG
FAALWLRDVP MLDPAFGDAG QIFDPFVYAG LLAGVTQRIC IGTAGIVMTL RHPLTVAKQA
CSLDVLLKGR FLLGLSTGDR PSEYPAFGQD FDTRAARFRE CVEILRAVTE HSFPLLTTQH
YGQLNGELDL LPKPWSGRLP MLAVGRCGQD IKWLANHMDG WIWHQSGFNT LPEVIDHWRE
SNVQKRFKPY GYATFFDLDD NKDAPMTVGR GISTGRNALI RLWERQREEG VSHVALNLKP
LKRPAKEVLQ ELEEYVLPYF PTRRGNPV
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