Gene PSPTO_3143 details

Gene Information

• Locus tag: PSPTO_3143
• ID: 1184800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3531086
• End bp: 3531622
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637394501
• Product: nicotinamide-nucleotide adenylyltransferase, putative
• Protein accession: NP_792935
• Protein GI: 28870316
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG3172] Predicted ATPase/kinase involved in NAD metabolism

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.012587
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGTGT TGGTGCTGAC CGGCCCGGAA TCGAGCGGCA AGAGCTGGCT CTCGGCCGAA 
ATACAGCGTC GGTTCGGCGG GGTTCTGGTC GGCGAATACG TGCGTCACTT CATTGATCAA 
CAAGACCGCG ATACGACCTA CGTTGATATT CCGGCTATTG CTCAGGGTCA GTTGGCCTGG 
GAAGACGCCG CACGTACTGC GCTGCCCCGC TTGCTGATTC TTGATACGCA CTTGCTGAGC 
AACCTGCTCT GGAGCCGCGC CCTGTTCGGC GATTGCCCGG CGTGGATCGA ACAGCAGTTG 
CTGAGCAGAA CCTACGACCT GCACCTGCTG CTGTCCCCCG AAGGCGTGGA ATGGATCAGC 
GACGGGCAGC GCTGCCAGCC CCACCTGCGC GAGCGTCAGG CCTTTTTCGA CGCCGGCCGG 
GAGTGGCTGG CCCGCCATCA TCAGACCTTT CAAGTGATCG GCGGCGACTG GCAACAACGC 
CGTGAACAGG CGATGGCGGC TGTCTCGCTG TTACTGGAGC CTTCAGCGGA GCTATAA 

 

Protein sequence

MRVLVLTGPE SSGKSWLSAE IQRRFGGVLV GEYVRHFIDQ QDRDTTYVDI PAIAQGQLAW 
EDAARTALPR LLILDTHLLS NLLWSRALFG DCPAWIEQQL LSRTYDLHLL LSPEGVEWIS 
DGQRCQPHLR ERQAFFDAGR EWLARHHQTF QVIGGDWQQR REQAMAAVSL LLEPSAEL