| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3137 |
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| Symbol | |
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| ID | 1184794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3526652 |
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| End bp | 3527611 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394495 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_792929 |
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| Protein GI | 28870310 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00811136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGATC TCAACGATCT GTTTTATTTC GTCCAGGTGG TCGAATGCCG AGGCTTTGCG
CCTGCCAGCC GCAAGCTCGG AATCCCCAAG TCCAAGCTCA GTCGACGCAT TGCCGGACTG
GAAGAGCGCC TGGGCGTTAG CCTGATTCAT CGTTCGACCC GCAAGTTTGC CGTGACTGAA
AGCGGTCGTG ATTATTACGG CCATTGCGTG GCGATGCTGG TGGAGGCCGA CGCTGCCGAA
GAAGCCATTC AGCGTTCCAA ATCCGAACCT CAGGGCAAGG TGGTTATCAG TTGCCCGCCT
GCGATGGCAG CCATGGGCAT CAATGAGGCC ATTGCCGGTT TCATGGCGGC GCACCCCAAA
GTGCAGGTGC ACATCGAAAG CACCAACCGG CGTGTCGATC CGCTGATCGA GAACATCGAT
ATTGCATTGC GGGTACGTTT TCCGCCGCTG GAAGACGACG GTCTGGTGGT CAAAACGCTG
GGCCACAGCG CGCAACGGCT GGTTGCACAC CCTGATCTGG CTGCGCTGCT CCCGGCTAAC
GCATCATTTG AAGCGTTAGC CAGGCTGCCG AGTCTTGATG TGACGTCTTC CACGCCGGAA
CATCGCTGGC TGCTGGAAAA CGGACCGGGC CATTACGTCG AAGTGCGGCA CGCGCCGCGG
CTGGTCAGCT CGGACCTGGA CGCTATCCTG CAAGCAGCTC TACAAGGTGT CGGTGTGGCG
CAACTGCCGG AAATTCTGGT CAGGGAAGCC TTGCAGCAGG GCCGTATGGT GGAGCTGTTC
GATGCGCATC GACCCAAGTG CGGCATTCTG CACGCAGTGT TCGTCTCGCG CCGGGGTCTG
CTGCCCGCCG TCAGGGGCTT GCTGGATGCC TTCGAGAGCT CGTTCACGGA ACTGACGCAC
AATCCAGAGT CGCTTTATTG TTCCTTACAT AGAACGAACA GTCGCATTCA GGGCGACTAA
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| Protein sequence | MFDLNDLFYF VQVVECRGFA PASRKLGIPK SKLSRRIAGL EERLGVSLIH RSTRKFAVTE
SGRDYYGHCV AMLVEADAAE EAIQRSKSEP QGKVVISCPP AMAAMGINEA IAGFMAAHPK
VQVHIESTNR RVDPLIENID IALRVRFPPL EDDGLVVKTL GHSAQRLVAH PDLAALLPAN
ASFEALARLP SLDVTSSTPE HRWLLENGPG HYVEVRHAPR LVSSDLDAIL QAALQGVGVA
QLPEILVREA LQQGRMVELF DAHRPKCGIL HAVFVSRRGL LPAVRGLLDA FESSFTELTH
NPESLYCSLH RTNSRIQGD
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