| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3132 |
|---|
| Symbol | |
|---|
| ID | 1184789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3522528 |
|---|
| End bp | 3523301 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637394490 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_792924 |
|---|
| Protein GI | 28870305 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.226704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG CCTTTGTAGT GAGCGACAAC GCATCGGACC AAGGCACACC GCTGGCCGCC
TGGAATGCCT CGGCCAGACT GGGCGCATTG CCGGCGATCA CCGCCGACCT GCTGGTGCCG
CCCAACTGCA GGGCGGTGAT CATCGCCCCG CACCCGGATG ATGAAATACT TGGCTGCGGC
GGCCTGATGA GCCAATTGGC GCAACTGCAA CGCAACCTGC TGCTGATTTC GGTGACCGAC
GGCACCGCCA GCCATCCGGG CTCGGCGCTC TGGCCTGTCG AGCGCCTTGC AGACTGCCGT
CCTCAGGAAA GCGCACAAGC CCTGAACCGT CTCCAAATCC CCCTTGAACA GCTCGCCTGG
ACAAGAGGCG GCTTTGCAGA TGGCACGCTT GGCGAACATG AAGACCGGCT GGTGGAGTTT
CTTGCCCAGC AGTTGGGGCC CACCGATGTG GTGTTTGCCA CTTGGGCAGG CGACGGCCAC
CCCGATCATG AAGCCGTCGG CCGCGCCAGT GCCAGAGCCT GCGCCATAAC CGGCGCGCAG
CTTCACGAAG TACCGATCTG GGCCTGGCAC TGGGCTGACC CCGAGGACGA GCGTTTGCCC
TGGGATCGTG CTCGCAAACT GTTGCTGGAC CCCACGACAC TCGCGCACAA ACGCAGTGCG
GCTCAGGCTT TTACCAGTCA GTTGCAGGGC GACCCCGCCA TCGGCTTGGC GCCGGTACTG
CCCGAGGCTG TTCTGGAGCG CCTGCTGCAA CCCTTTGAGG TGGTGTTTAC ATGA
|
|---|
| Protein sequence | MSEAFVVSDN ASDQGTPLAA WNASARLGAL PAITADLLVP PNCRAVIIAP HPDDEILGCG
GLMSQLAQLQ RNLLLISVTD GTASHPGSAL WPVERLADCR PQESAQALNR LQIPLEQLAW
TRGGFADGTL GEHEDRLVEF LAQQLGPTDV VFATWAGDGH PDHEAVGRAS ARACAITGAQ
LHEVPIWAWH WADPEDERLP WDRARKLLLD PTTLAHKRSA AQAFTSQLQG DPAIGLAPVL
PEAVLERLLQ PFEVVFT
|
|---|
| |