Gene PSPTO_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3129 
Symbol 
ID1184786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3518735 
End bp3519148 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content60% 
IMG OID637394487 
Producthypothetical protein 
Protein accessionNP_792921 
Protein GI28870302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG ACGAAAAAAG AATTCGCGAT TTTGCCTATC AGATCTGGGA ATCGGAAGGT 
AAACCCTCCG GTCATGATGA GCGTCACTGG GAAATGGCGC GCAAGCTGGC AGAGGCCGAG
GCACTGGCAC CCAACAAGTC CACCGTGCGC AAATCCACCA AACCGAAACT GCCTGAGGTA
GACAGCGCCA AGGCGCCTGC CAAAGGCGCG GCCAAGCCGG TGGCCAAGTC GGCTCCTGCG
CCAAAGCCTG CGGCCGACAG CAAACCCAAG GCAGCGCCTA AAGCAGCTCC GAAGCCTGCG
GCCAAGCCGG CTGCAAAACC GGCAACTGCG GCGGCGTCCA ATGCGCCGGC CAAAAAAGAT
GCACCTGCCA AACCTGCTGC TGCCAAGAAG CCGCGCAAGC CGTCAAATTC TTGA
 
Protein sequence
MSADEKRIRD FAYQIWESEG KPSGHDERHW EMARKLAEAE ALAPNKSTVR KSTKPKLPEV 
DSAKAPAKGA AKPVAKSAPA PKPAADSKPK AAPKAAPKPA AKPAAKPATA AASNAPAKKD
APAKPAAAKK PRKPSNS