Gene PSPTO_3096 details

Gene Information

• Locus tag: PSPTO_3096
• ID: 1184753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3480059
• End bp: 3480703
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637394455
• Product: hypothetical protein
• Protein accession: NP_792889
• Protein GI: 28870270
• COG category: [K] Transcription
• COG ID: [COG3617] Prophage antirepressor

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.880364
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTTTTT GCCCGGTTCG CCAACCCTCG CACAGCTGCC ACCCATTCGT TTGGCGACGA 
TTCGTGGCGG CTCTTGATAA ACAAAAAAGA GTGTCATACA TGCAAAATAT TGCTCTCAGA 
AACACCCACA CCGCCTATTT CGACGCCACT CTGTTTCTGC GCCACAGTCG CATGCTGCGC 
GCCATTTTTA CTGACGCCCA GGCGTGGTTC TGTCTGGCCG ACCTTGCCCG GCTGATGGGC 
AAGGCGCTGG ACCAGCGCGC CACGCTCAAG CTTGATGCGG ATCAGCGTCG CGAGGTCTGG 
TTGCAGGCCA ATGGCGAGTG CCAGCGGCAA TTGATGATCA GCGAGTCCGG CACGCTGGCG 
CTGCTGGTTC ATCACTACGT GCCGGAGAAC CGCGCGCTGC GGCAGTGGCT GACGCATGAG 
GTGCTGACGG TTTTACACGA TCAACAAAAC GTGATCCTGG ACAACCCCAG AATGACCCAA 
CTGCAATGGC CGGGCACTTC GTTGAGCGTG CTGCACTGGC GCAGCGAAAC CTGGATTCGG 
TTGCGCGATA TGCCGAATGT GGTGACCGAG GCAGCGCCCC GGCCGCAGCC GGCGTTATGG 
CGCAGGGTGT TGAAGCGGAT GGAATGCAAA CGCACCGTTG ATTGA 

 

Protein sequence

MSFCPVRQPS HSCHPFVWRR FVAALDKQKR VSYMQNIALR NTHTAYFDAT LFLRHSRMLR 
AIFTDAQAWF CLADLARLMG KALDQRATLK LDADQRREVW LQANGECQRQ LMISESGTLA 
LLVHHYVPEN RALRQWLTHE VLTVLHDQQN VILDNPRMTQ LQWPGTSLSV LHWRSETWIR 
LRDMPNVVTE AAPRPQPALW RRVLKRMECK RTVD