Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3092 |
Symbol | |
ID | 1184749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3475664 |
End bp | 3476500 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394452 |
Product | hypothetical protein |
Protein accession | NP_792886 |
Protein GI | 28870267 |
COG category | [R] General function prediction only |
COG ID | [COG4798] Predicted methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.118723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG CCCTCATCGC GTTAAGCCTC GCCACCCTCC TGCTGCCCGG TATCAGCCAG GCTGCCTCGC CCGACGCGCA CATCAGCGAC GAGCAATACG CCACAGTGCT CAAGGGCCCT TGGCGAGCCA AGGAAAACAG CGCGCGCGAC ACCTATCGCC ATCCACAACA GACCCTGCAG TTTTTCGGTG TGCGGGCCGA CCAGACGGTC ATCGAAATCA CCCCCGGTGG CGGCTGGTAC AGCGAAATTC TTGCGCCATT GCTCAAAGAC CGCGGCCACT ACATTGCGGC GCTACAGGCG CCCTCTTCCG ATGAATCAAG CAAGCAGGCC GCAGACCGCC TTAAAAAGAA ATTCCAGGCC GACCCCGCAC GTTATGCCAA CGCCGGATTC GTCGAGTTCG ACCCGCAAAA ACCGGTGTTT GGCGCACCCG ACTCGGCCGA TCAAGTGCTG ACCTTTCGCA ACGTGCACAA CTGGATCGAG GCCGACGATG CCCGGCAAAT GTTTACCGGG TTCTTCGACG TACTCAAACC GGGCGGCGTG CTGGGTGTTG TAGACCATCG AGGCAACGAA GGCGCAGACC TGCAGAGCAT CAAGCAAAGT GGCTACCTGC CCACCGCCTA CGTCGTGAAA CTGGCCACCG AAGCAGGCTT TGAACTGCAA GCGCAAAGCG AAATCAACGC CAACCGCAAA GACACCAAGG ACTACGAGGC AGGCGTCTGG ACACTGCCGC CGGCCTTGAA GCTGGGTGAC AAGGAGCGCG CCAGGTACCT GGCCATTGGC GAGTCGGACC GCTTTACACT GCGCTTTGTA AAACCGATCA AGACGGCAAG CCGGTAG
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Protein sequence | MNKALIALSL ATLLLPGISQ AASPDAHISD EQYATVLKGP WRAKENSARD TYRHPQQTLQ FFGVRADQTV IEITPGGGWY SEILAPLLKD RGHYIAALQA PSSDESSKQA ADRLKKKFQA DPARYANAGF VEFDPQKPVF GAPDSADQVL TFRNVHNWIE ADDARQMFTG FFDVLKPGGV LGVVDHRGNE GADLQSIKQS GYLPTAYVVK LATEAGFELQ AQSEINANRK DTKDYEAGVW TLPPALKLGD KERARYLAIG ESDRFTLRFV KPIKTASR
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