Gene PSPTO_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3092 
Symbol 
ID1184749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3475664 
End bp3476500 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID637394452 
Producthypothetical protein 
Protein accessionNP_792886 
Protein GI28870267 
COG category[R] General function prediction only 
COG ID[COG4798] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.118723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG CCCTCATCGC GTTAAGCCTC GCCACCCTCC TGCTGCCCGG TATCAGCCAG 
GCTGCCTCGC CCGACGCGCA CATCAGCGAC GAGCAATACG CCACAGTGCT CAAGGGCCCT
TGGCGAGCCA AGGAAAACAG CGCGCGCGAC ACCTATCGCC ATCCACAACA GACCCTGCAG
TTTTTCGGTG TGCGGGCCGA CCAGACGGTC ATCGAAATCA CCCCCGGTGG CGGCTGGTAC
AGCGAAATTC TTGCGCCATT GCTCAAAGAC CGCGGCCACT ACATTGCGGC GCTACAGGCG
CCCTCTTCCG ATGAATCAAG CAAGCAGGCC GCAGACCGCC TTAAAAAGAA ATTCCAGGCC
GACCCCGCAC GTTATGCCAA CGCCGGATTC GTCGAGTTCG ACCCGCAAAA ACCGGTGTTT
GGCGCACCCG ACTCGGCCGA TCAAGTGCTG ACCTTTCGCA ACGTGCACAA CTGGATCGAG
GCCGACGATG CCCGGCAAAT GTTTACCGGG TTCTTCGACG TACTCAAACC GGGCGGCGTG
CTGGGTGTTG TAGACCATCG AGGCAACGAA GGCGCAGACC TGCAGAGCAT CAAGCAAAGT
GGCTACCTGC CCACCGCCTA CGTCGTGAAA CTGGCCACCG AAGCAGGCTT TGAACTGCAA
GCGCAAAGCG AAATCAACGC CAACCGCAAA GACACCAAGG ACTACGAGGC AGGCGTCTGG
ACACTGCCGC CGGCCTTGAA GCTGGGTGAC AAGGAGCGCG CCAGGTACCT GGCCATTGGC
GAGTCGGACC GCTTTACACT GCGCTTTGTA AAACCGATCA AGACGGCAAG CCGGTAG
 
Protein sequence
MNKALIALSL ATLLLPGISQ AASPDAHISD EQYATVLKGP WRAKENSARD TYRHPQQTLQ 
FFGVRADQTV IEITPGGGWY SEILAPLLKD RGHYIAALQA PSSDESSKQA ADRLKKKFQA
DPARYANAGF VEFDPQKPVF GAPDSADQVL TFRNVHNWIE ADDARQMFTG FFDVLKPGGV
LGVVDHRGNE GADLQSIKQS GYLPTAYVVK LATEAGFELQ AQSEINANRK DTKDYEAGVW
TLPPALKLGD KERARYLAIG ESDRFTLRFV KPIKTASR