| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3090 |
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| Symbol | |
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| ID | 1184747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3473065 |
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| End bp | 3473982 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637394450 |
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| Product | nickel ABC transporter, permease protein, putative |
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| Protein accession | NP_792884 |
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| Protein GI | 28870265 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0450964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTT TCGACGACCG CCTTGCACGC CTGACCCAGG CTGTTCTGAC CTCTAAAACC
CCATCGGCGG CGCAATGGCG ACGACGCAGC AACCTGAGCC GAGTGATCGA GGCGGTCAGG
CCGCTGCTGC GTCGGCCGGG GTTTGTGCTC GCCGTAGCGT TGGTGGCCTT TGCGCTACTG
GCGGCGCTGG CACCCAACCT GTTGACCAGC TACGCGCCTT ACGCCACCTC GCCCACCGAC
AAACTCATCC CGCCGAACGC CGTGCACTGG TTTGGCACCG ACGAACTGGG CCGTGATCTT
TATACCCGCG TTGTGCATGG CTCCAGCCTG TCGGTGCAGG CCGCCCTGCT GGCGGTGGGC
ATTGCCATGG CCGGCGGCCT GAGCCTTGGG GTGATTTCCG GTTTTGCGGG GGGCCGCATC
GATGCCGTGA TCATGCGTTT CATCGACGTA TTGCTGGCGC TGCCCGGCCT GCTGCTCGCG
CTGGCGATTG TCACCGCCAT CGGTTTCGGC ACCCTTCCGG TGGCTATCGC GTTGGGCGTG
GGGATCATTC CCGGTTTCGC CCGCACCACC CGCGCCGAGG TGCTGCGGGT CAAGACACTG
CCGTACGTGG AAGCGGCGCG GCTGGGCGGC GCCAGCTGGA CCCGCACCTT GCTGCGGCAC
ATTCTGCCCA ACGCCTGGGG CCCGGTGGCG GTGCTCGCCA CGCTGGATTT CGGCGCGGCG
ATTCTGGCCA CCGCCGGGCT GAGCTTTCTC GGCTTCGGCG CTGAACCGCC AGCCGCCGAA
TGGGGCACGC TGATTGCCAA TGGCCGTCAC TTCCTGATGA CGGCGCCTTG GGTGTCGCTG
CTGCCCGGTC TGTTTCTGGT TGGCGTGGTA TTCAGCTTCA ACCACATCGC CCGCACTCTG
GAAGAGGTTC AACGATGA
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| Protein sequence | MTIFDDRLAR LTQAVLTSKT PSAAQWRRRS NLSRVIEAVR PLLRRPGFVL AVALVAFALL
AALAPNLLTS YAPYATSPTD KLIPPNAVHW FGTDELGRDL YTRVVHGSSL SVQAALLAVG
IAMAGGLSLG VISGFAGGRI DAVIMRFIDV LLALPGLLLA LAIVTAIGFG TLPVAIALGV
GIIPGFARTT RAEVLRVKTL PYVEAARLGG ASWTRTLLRH ILPNAWGPVA VLATLDFGAA
ILATAGLSFL GFGAEPPAAE WGTLIANGRH FLMTAPWVSL LPGLFLVGVV FSFNHIARTL
EEVQR
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