| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3073 |
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| Symbol | |
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| ID | 1184730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3455936 |
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| End bp | 3456694 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394433 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_792867 |
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| Protein GI | 28870248 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC AAATCGCACT CATCACCGGC GCCAGCCGTG GCCTTGGCCG CAACATGGCC
CTTCACCTTG CCAAGCGCGG CGTGCACATC ATCGGCACTT ACCGCAGCGG CGTGGCACAA
GCCCACTCGT TGAAGCAGGA AATCGAGGCG CAAGGCGGAA AGATTGCGCT GCTGCCCCTG
TACATCACCG AAACCGCCAG CTATCCGGCC TTTTCAAGCG CCGTGACTGA CACGCTGAAG
ACCGAGTTCG CCCGCGAGCG CTTCGACTTT CTCGTCAATA ATGCCGGCAA TGGCCTGTTC
GCGAACTTTG TCGACGCAAC CGAAGAGCAG TTTGCCTCAC TGGTCGCCAC GCACCTTCGC
GGCCCGGTTT TCCTCACCCA GAAGCTGTTG CCGCTGATGG AAGACGGTGG CCGTGTCCTT
AACGTTTCCT CAGGCTTCGT GCGTTTCACC CTGCCCGGCT ACAGCCTTTA TGCCGCGGTA
AAAGCGGCGC TGGAAGTGCT GACCCGGTAC ATGGCCGTAG AGCTAGGCTC GCGTCAAATT
CGGGTGAATG CCATTGCCCC TGGTGCCATC GCAACCGATT TTGGCGGCGG CGCAGTGCGC
GACAACAAAG ACGTGAACGC CTATGTAGCA CAAGGCATCG CTCTGGGACG TGTCGGCCTG
CCAGCTGACA TAGGCGCAGC GGTCGCCGCG ATTCTGTCCG ATGACATGGC CTGGGCCAAC
GGCACGACGT TTGATGTTTC CGGTGGGCAG TTGCTTTAA
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| Protein sequence | MTQQIALITG ASRGLGRNMA LHLAKRGVHI IGTYRSGVAQ AHSLKQEIEA QGGKIALLPL
YITETASYPA FSSAVTDTLK TEFARERFDF LVNNAGNGLF ANFVDATEEQ FASLVATHLR
GPVFLTQKLL PLMEDGGRVL NVSSGFVRFT LPGYSLYAAV KAALEVLTRY MAVELGSRQI
RVNAIAPGAI ATDFGGGAVR DNKDVNAYVA QGIALGRVGL PADIGAAVAA ILSDDMAWAN
GTTFDVSGGQ LL
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