| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3068 |
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| Symbol | |
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| ID | 1184725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3450465 |
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| End bp | 3451592 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394428 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_792862 |
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| Protein GI | 28870243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.547079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGGT TTATTTGCAT CGTGACCGAG ACGCTGCCTG CGGGTTTGCT GCCCGAGATC
GGCACGGGCC TTGGGGTATC GGCGTCGTTT GCCGGGCAGA TGGTGACCGT TTACGCGCTA
GGGTCACTGC TGGCCGCCAT CCCGCTGACC ATCGCCACGC AAAGCTGGCG CCGCAGGACG
GTGTTGCTGC TGACGATCAT CGGCTTTCTG GTGTTCAATT CCGTCACGGC GCTGTCGTCC
GATTACTGGC TGACGCTGGT CGCGAGGTTT TTCGCCGGCG TTTCTGCGGG CCTCGCCTGG
AGCCTTATCG CGGGTTATGC ACGGCGCATG GTGGTGCCGC AATTGCAGGG CCGCGCCCTG
GCGATAGCCA TGGTGGGAAC GCCCATCGCG TTGTCGCTGG GCGTGCCTCT GGGCACCTGG
CTGGGCGGGT TTATGGGCTG GCGCATGGCA TTCGGATTGA TGTCGGCGAT GACCTTGCTG
TTGATCGTCT GGGTGCTGGT CAAGGTGCCG GACTACCCTG GCCAGTCCTC GTCACAGCGC
ATGGCATTGC GTCAGGTGTT CTTCACTCCT GGCGTACGCT CGGTACTGGG CGTGGTCTTC
ACCTGGATGC TGGCTCACAA CATTCTTTAT ACCTACGTCG CGCCCTTTGT TTCCGGGGCC
GGACTGGCGA GTGACGTTGA TTGGGTGTTG CTGACATTTG GTATCGCCGC GCTGGCGGGT
ATCTGGGTAA CGGGACGGCT GGTTGATCGC CATCTGCGCA AGACCGTGTT GGCAAGCCTC
GCAACCTTCG CAGCGGTTTC GGTTTTTCTG GGCGTGTTCT CAGGCTCTGC ACCGGCTGTC
TACTTGGGGG TGTTTATCTG GGGGCTGACG TTTGGCGGCG CTGCCACGCT TCTGCAAACC
GCGCTGGCCG ATTCGGCAGG CGAAGGCGCT GACGTGGCGC TTTCGATGAA CGTGGTTGTC
TGGAACAGCG CAATTGCCGG TGGTGGTTTG TTGGGGGGTG TTTTGCTTGG GCATTGGGGC
GTGGGTGTAT TCCCCTGGGT CTTGCTTGTG TTGTCAGTGC TGAGCCTGGT GATTGCGTTG
CGTGCTCGGG TTCATGGCTT TGCGGGAGGT AATCGGCTTA CAAAGTAA
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| Protein sequence | MTGFICIVTE TLPAGLLPEI GTGLGVSASF AGQMVTVYAL GSLLAAIPLT IATQSWRRRT
VLLLTIIGFL VFNSVTALSS DYWLTLVARF FAGVSAGLAW SLIAGYARRM VVPQLQGRAL
AIAMVGTPIA LSLGVPLGTW LGGFMGWRMA FGLMSAMTLL LIVWVLVKVP DYPGQSSSQR
MALRQVFFTP GVRSVLGVVF TWMLAHNILY TYVAPFVSGA GLASDVDWVL LTFGIAALAG
IWVTGRLVDR HLRKTVLASL ATFAAVSVFL GVFSGSAPAV YLGVFIWGLT FGGAATLLQT
ALADSAGEGA DVALSMNVVV WNSAIAGGGL LGGVLLGHWG VGVFPWVLLV LSVLSLVIAL
RARVHGFAGG NRLTK
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