Gene PSPTO_3066 details

Gene Information

• Locus tag: PSPTO_3066
• ID: 1184723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3448873
• End bp: 3449457
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637394426
• Product: membrane protein
• Protein accession: NP_792860
• Protein GI: 28870241

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.055034
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGTCG CGAAGGTTAA GCCTGTGGGT GAACCATCGG TCAGTACCGA ACGGACTTCT 
GGCAGTGCCC GCCCACAACT CGGAATAGTT CTCTGCCTGC TTTCAATGCT CACCTTTGCA 
ACGCAGGACG GGATCACCAA GGTGCTGGTC AAAGACCTTC CTGTCGCGCA GATGATCATG 
GTGCGCTATT GGGTATTCGT GATTTTTGCG GTGGGGTATG CCACCTGTCA CGGCAGTCTC 
AGGGCTTCTG TACGGAGCGC AAAACCCGGA CTTCAAATTA CCCGGGCACT CCTGGGAGTG 
ACCGACGTAG TCCTTTTCGC CTTTGGATTG CGATTTCTGG GCCTTGCGCA AATGCACGCG 
CTTTACGCAG TGTTTCCATT GATGACGCTG GGCCTTGCAG GGATGATTCT GGGCGAATTC 
ATTGGCCTGC GTCGTTGGAT AGCTGCAGCG GTAGGGTTCG CCGGGACCTT TGTCATACTT 
CGCATGGACA TTAGTCGGCG CTTCACTGGT TATTATCGGT GGTTTATACG CCATAAAAGC 
CTGATCCAGA CTGCCGCTTC AAGACACAGA TGGCATGCAA GCTGA 

 

Protein sequence

MPVAKVKPVG EPSVSTERTS GSARPQLGIV LCLLSMLTFA TQDGITKVLV KDLPVAQMIM 
VRYWVFVIFA VGYATCHGSL RASVRSAKPG LQITRALLGV TDVVLFAFGL RFLGLAQMHA 
LYAVFPLMTL GLAGMILGEF IGLRRWIAAA VGFAGTFVIL RMDISRRFTG YYRWFIRHKS 
LIQTAASRHR WHAS