| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3063 |
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| Symbol | |
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| ID | 1184720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3445128 |
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| End bp | 3446039 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394423 |
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| Product | dihydrodipicolinate synthase, putative |
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| Protein accession | NP_792857 |
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| Protein GI | 28870238 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0586841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATTCG AAGGCATCTA TACACCCGCG GTGACGCCGC ACACGCCTGA TGGCGACATT
GACTGGGCGG TATTCTCTGA AGTGCTGGAG TCTCTTATAG AGGCAAACGT GCATGGCATT
ATTATCGGCG GTTCGACCGG CGAATATTAC GCACAGACTG CCGAAGAGCG TTTGAAACTC
GCCGCTCACG CCAAGGATGT GATGGGTAAC CGGGTGCAAT TGATCATCGG CACCGGCGCG
ATCCGCACCG AAGATGCCGT GCTGTTTGCC AAGGATGCCA AGGCCCTCAA GGCCGATGCC
ATATTGGTCA CCACCCCGCC CTACGCATTG CCAACGGATC AGGAAAACGC CATACATGCG
CTGACCATCG ATCGCGCGGC CAACATGCCG ATCATGTTGT ACAACTACCC GGGGCGGATG
GGCGTGCAAA TGAACGAGGA CTACCTCGCT CGCGTGGGCA AGTCCAAAAA CGTCATTGCC
ATCAAGGAAA GCTCCGGGGA AATGGGCCGT GTGCATTTGC TCGCCCGTGA GTTCCCGCAT
ATCGCCCTGT CCTGTGGCTG GGATGATCAG GCGCTGGAGT TCTTCGCCTG GGGTGCCAGA
AGTTGGGTAT GTGCCGGTTC CAATTTCCTG CCCAGAGAAC ACGTTGCACT GTATGAAGCC
TGTGTGATTG AAAAGAACTT CGACAAGGGT CGGCAAATCA TGTCGGCCAT GATGCCGCTG
ATGCACGCAC TCGACGGTGG CAAGTTCGTA CAGTGCATCA AGTTTGGTTG TGAGTTGAAC
GGTCTGAAAG TCGGGGATGT GCGCGCGCCC TTGCGCCCGT TGAACGCTGA AGACAAAAGA
AGTCTTCAAA CCGTTATTGC CAACGTTAAG CGCACCGTCG CCCACATTAT CTCCGGAGCC
AGCCATGCAT GA
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| Protein sequence | MRFEGIYTPA VTPHTPDGDI DWAVFSEVLE SLIEANVHGI IIGGSTGEYY AQTAEERLKL
AAHAKDVMGN RVQLIIGTGA IRTEDAVLFA KDAKALKADA ILVTTPPYAL PTDQENAIHA
LTIDRAANMP IMLYNYPGRM GVQMNEDYLA RVGKSKNVIA IKESSGEMGR VHLLAREFPH
IALSCGWDDQ ALEFFAWGAR SWVCAGSNFL PREHVALYEA CVIEKNFDKG RQIMSAMMPL
MHALDGGKFV QCIKFGCELN GLKVGDVRAP LRPLNAEDKR SLQTVIANVK RTVAHIISGA
SHA
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