| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3056 |
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| Symbol | |
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| ID | 1184713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3436246 |
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| End bp | 3437280 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394416 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792850 |
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| Protein GI | 28870231 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.351096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATG TTTTCGAAAG CGTCCTTCAG GACCAGAACA TGCGGTATTC GTCTTCCGGC
AAGAAGGCAG TCAACCCACG AGCCGTCATT CGGGTAGCGT TTATCCTGAT GGACAACTTT
TCGTTGATGT CCTTTACCGC CGCGATGGAC GCACTGGTCA CGGCAAACCT GATGGGCGAT
GCTCCGATTT TCGATATCGT GAAGATCGGC CTCAAGGGCA GGGTGGCGAT GAGCGATCTC
GGTATCGCGA TCCCCACGGA CCTGGATCTT TCGGAGCTGC GTGCGCGGCA TGACTTGCTG
CTGGTGGTCG GCGGCCTGCG TGTCGATCTG AAAAGCACGC CCTGCCTGCG GCGCAAGTTG
TTTGCGGCGG CTTCTGCGGG CACCAGCCTG GGCGGGCTGT GGAATGGCGC TTACTTCCTG
GCCGATGCGC GGGTAATGGG GGGGCACACG TGCGCCGTTC ACCCTGATGG ACGGGCCATG
ATGGCCGATG CTTTTCCTGA CTTGAGAATC TCTGACCGCA GCCACGTCGT TGATCTGGAG
CGGGTGACTT GTGCGGGTGC CAGTAGCTCG TTGCGCATGA TGCTGGAATA CATCCGCGTC
ACCAAAGGCA GTTCACTGGC CCGCGCGGTA GAGGAAATCC TCGGCTGTGA CGAGCATGAA
CAGGTCTGTG GTGTGTCGAC TGTCGCCGTC GACTCGGACC CGACCTTGCC GCAGGCGCTG
AAGGTGGCAT TGGAGCTGAT GCAGAAAAAC ATCGAAGAGC CCCTGAGCCT GGACGACCTG
GCGGCCTGTG CAGGGATCTC GAAAAGACAG CTGGAGCGGC GTTTCTTCCG CTTCATCGGG
GCCGCCCCGG CTCGCTACTA CCTTGAATTG AGGCTGACCC GGGCCAGACA ACTTGTGCTG
CAGACCAACC GATCCATAAC GGATATCGCC ATGGCGACCG GGTTTATCAG CATGCCGCAT
TTCCACCGGC GGTTTCGCGA CTTCTTCGAT GCTGCGCCGG GAAGTTATCG GGCAACGTAT
GAAGTTCGCA AGTGA
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| Protein sequence | MTYVFESVLQ DQNMRYSSSG KKAVNPRAVI RVAFILMDNF SLMSFTAAMD ALVTANLMGD
APIFDIVKIG LKGRVAMSDL GIAIPTDLDL SELRARHDLL LVVGGLRVDL KSTPCLRRKL
FAAASAGTSL GGLWNGAYFL ADARVMGGHT CAVHPDGRAM MADAFPDLRI SDRSHVVDLE
RVTCAGASSS LRMMLEYIRV TKGSSLARAV EEILGCDEHE QVCGVSTVAV DSDPTLPQAL
KVALELMQKN IEEPLSLDDL AACAGISKRQ LERRFFRFIG AAPARYYLEL RLTRARQLVL
QTNRSITDIA MATGFISMPH FHRRFRDFFD AAPGSYRATY EVRK
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