| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3053 |
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| Symbol | |
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| ID | 1184710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3434473 |
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| End bp | 3435234 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394413 |
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| Product | hypothetical protein |
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| Protein accession | NP_792847 |
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| Protein GI | 28870228 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0310931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCTA CTCTTCTTTT GTGCGCGTTT TTGTTCATGG TCTTTACCTA CCCTCAAGCT
TGGGCACAGG ACCGTGAAGG TCCACAGGCC GGCCTGGGCG AGCAATTAGC CAGCTACGGC
ATTCAGCCCC ATGTGCAATT CACCAGCCTG TCGATGAAAA ACCTCGACAC CGGCCCGCGC
CCCTACAGCT TCGGTAACAG CGGTGACCTG TACATCGGCG CAGATGTTGA CCTCGCCACC
CTCAGTGGCC TGGACGGCGC GGCCCTGCAT TTCGAGCAGA CCATCTTTAT CCTCGATAAC
GGGACCGGCC AGCCGACCGG GGGCGAATGG CAAGGCGCCG TCGGCAGCTA TTTTGGCGGT
GCGCCCTTGC ACAATGACAT CGCCAGCAAT CAGTTGAGCC TGTTGACCTA CAAGCAAAAA
TGGCTCGATG GTCAGCTCGA CCTGCACGTC GGACGGACCA ATGGCCGGCG GTACTTCTAC
ATCTATAACT GCGAAACGGG GGTCACCTGC AACGACCCGA TCCTGGATGC TTCAAGCGGC
ATGTTGCCGC CACCCTTCGG TGCTTGGGGC GGGTACCTGA AGTATCAAGT GAACCCGCGT
TTTTATGTGC ACGCGGGTGC GTTTGAATCC AACCCGGTGG ACTACCTGAA AAAGCGCAAA
GGTCTGGATT TCAGCACCGA CGACGCGAGT GGCACCAGCT TCCTGGTAGG CATTGGCAGC
AAGCCTGGCG ATAACACCAC CCAGTACGAA CTGAATGCGT AA
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| Protein sequence | MHPTLLLCAF LFMVFTYPQA WAQDREGPQA GLGEQLASYG IQPHVQFTSL SMKNLDTGPR
PYSFGNSGDL YIGADVDLAT LSGLDGAALH FEQTIFILDN GTGQPTGGEW QGAVGSYFGG
APLHNDIASN QLSLLTYKQK WLDGQLDLHV GRTNGRRYFY IYNCETGVTC NDPILDASSG
MLPPPFGAWG GYLKYQVNPR FYVHAGAFES NPVDYLKKRK GLDFSTDDAS GTSFLVGIGS
KPGDNTTQYE LNA
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