Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3043 |
Symbol | |
ID | 1184700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3423692 |
End bp | 3424648 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637394403 |
Product | 5'-nucleotidase, putative |
Protein accession | NP_792837 |
Protein GI | 28870218 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.198153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGGCG TCGCTTCCAG CGCTGTGTTT GATTTGTTGG CATCGGACGC AGTGTTTCAG AGTCAGGGGG AGGAGGAATA CCGCAAGTTT CAGCAAAAAA ATCTTCACGT CCCGCTTCCT AAGGGGATAG CGTTCCCCTT CATCAAGCGC TTACTCTCAG TGAATGACCT TAGCGTCGAT CCTACGGATC CGCTCGTCGA GGTAATACTT CTTCCGCGCA ATGATCCCGA CACTGGGCTG CGTGTACTGA AGACTATCGA GCACTACGAG CTTGGGATGA CAAGGGCGAT TTTCATGCAG GGAAAATCTC CTTATGAATA CATACCAGCA CTGAATATCG CTTTATTTTT GTCGGGTGAC AAAAAAGACG TGGAAGCGGC TATCAGGGCC GGGTACCCGG CTGGCCAGGT GCTCGATTCA AAATTTGAAG ACGACGAGAC TGATAAAACC CTACGCATCG CATTCGACTT TGACGGCGTA CTCGCCGGCG ATGAGTCCGA AACAATCATG CAGGCCTCTG GATTGTCTGA GTTCCATTCG CACGAAGTGA AGAACGTCAT GCAGCCCCAT AACCCCGGGC CGCTGAAGGA ATTCATGGTG CGGATATCCA AAATCCAGTC GGTCGAGGAG AAGCACAAAA AGCTCAATCC TAAATACGAA AACCGCATAC GCGTCTCGAT CGTCACAGCC CGCAATGCTC CGTCTCATGA GCGTGCGATG AATACACTCA AGAGTTGGGG GGTCATGGCC AATGACGCAT TCTTCTTAGG TGGTATCGAG AAAGGAAAAA TTTTAAGTGT ATTGAAACCA CACATCTTCT TCGATGACCA ATCAGGGCAC CTTAAATCGA CTAGCGCAGT TGCTCCATCC GTGCACATTC CTTTCGGCAT CACCAACCAT GTCTCTACTG TGGATGCGAT AGAGCCTGAA GCGGATCAGG TCCAGCAGGT GGTGTAA
|
Protein sequence | MIGVASSAVF DLLASDAVFQ SQGEEEYRKF QQKNLHVPLP KGIAFPFIKR LLSVNDLSVD PTDPLVEVIL LPRNDPDTGL RVLKTIEHYE LGMTRAIFMQ GKSPYEYIPA LNIALFLSGD KKDVEAAIRA GYPAGQVLDS KFEDDETDKT LRIAFDFDGV LAGDESETIM QASGLSEFHS HEVKNVMQPH NPGPLKEFMV RISKIQSVEE KHKKLNPKYE NRIRVSIVTA RNAPSHERAM NTLKSWGVMA NDAFFLGGIE KGKILSVLKP HIFFDDQSGH LKSTSAVAPS VHIPFGITNH VSTVDAIEPE ADQVQQVV
|
| |