Gene PSPTO_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3043 
Symbol 
ID1184700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3423692 
End bp3424648 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID637394403 
Product5'-nucleotidase, putative 
Protein accessionNP_792837 
Protein GI28870218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.198153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGGCG TCGCTTCCAG CGCTGTGTTT GATTTGTTGG CATCGGACGC AGTGTTTCAG 
AGTCAGGGGG AGGAGGAATA CCGCAAGTTT CAGCAAAAAA ATCTTCACGT CCCGCTTCCT
AAGGGGATAG CGTTCCCCTT CATCAAGCGC TTACTCTCAG TGAATGACCT TAGCGTCGAT
CCTACGGATC CGCTCGTCGA GGTAATACTT CTTCCGCGCA ATGATCCCGA CACTGGGCTG
CGTGTACTGA AGACTATCGA GCACTACGAG CTTGGGATGA CAAGGGCGAT TTTCATGCAG
GGAAAATCTC CTTATGAATA CATACCAGCA CTGAATATCG CTTTATTTTT GTCGGGTGAC
AAAAAAGACG TGGAAGCGGC TATCAGGGCC GGGTACCCGG CTGGCCAGGT GCTCGATTCA
AAATTTGAAG ACGACGAGAC TGATAAAACC CTACGCATCG CATTCGACTT TGACGGCGTA
CTCGCCGGCG ATGAGTCCGA AACAATCATG CAGGCCTCTG GATTGTCTGA GTTCCATTCG
CACGAAGTGA AGAACGTCAT GCAGCCCCAT AACCCCGGGC CGCTGAAGGA ATTCATGGTG
CGGATATCCA AAATCCAGTC GGTCGAGGAG AAGCACAAAA AGCTCAATCC TAAATACGAA
AACCGCATAC GCGTCTCGAT CGTCACAGCC CGCAATGCTC CGTCTCATGA GCGTGCGATG
AATACACTCA AGAGTTGGGG GGTCATGGCC AATGACGCAT TCTTCTTAGG TGGTATCGAG
AAAGGAAAAA TTTTAAGTGT ATTGAAACCA CACATCTTCT TCGATGACCA ATCAGGGCAC
CTTAAATCGA CTAGCGCAGT TGCTCCATCC GTGCACATTC CTTTCGGCAT CACCAACCAT
GTCTCTACTG TGGATGCGAT AGAGCCTGAA GCGGATCAGG TCCAGCAGGT GGTGTAA
 
Protein sequence
MIGVASSAVF DLLASDAVFQ SQGEEEYRKF QQKNLHVPLP KGIAFPFIKR LLSVNDLSVD 
PTDPLVEVIL LPRNDPDTGL RVLKTIEHYE LGMTRAIFMQ GKSPYEYIPA LNIALFLSGD
KKDVEAAIRA GYPAGQVLDS KFEDDETDKT LRIAFDFDGV LAGDESETIM QASGLSEFHS
HEVKNVMQPH NPGPLKEFMV RISKIQSVEE KHKKLNPKYE NRIRVSIVTA RNAPSHERAM
NTLKSWGVMA NDAFFLGGIE KGKILSVLKP HIFFDDQSGH LKSTSAVAPS VHIPFGITNH
VSTVDAIEPE ADQVQQVV