| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3020 |
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| Symbol | |
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| ID | 1184676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3395538 |
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| End bp | 3396407 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394380 |
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| Product | hypothetical protein |
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| Protein accession | NP_792815 |
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| Protein GI | 28870196 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.375622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC TCGTTACTGG CGCCACGGGC ACCATCGGTT CACTCGTTAC GCAGGGCCTC
GCCAGCGCAG GTGCCGATGT CAAAGCCATG GTGCGCCAAC CCGGCAAGCG TGATTTTCCG
GCTGGCGTCA CCGAGGTAGT CGCAGACCTC ACTGATGTGT CCTCCATGCG TGTCGCGCTG
TCTTCGGTGC GCACGCTGTT TCTGCTCAAT GCAGTGACGC CCGATGAAGT TACGCAAGCG
CTGATCGCGC TGAACCTCGC TCAGGAGGCC GGTATCGAGC GCATCGTTTA CCTGTCCGTG
ATTCATGCCG ACACGTTCAC CAACGTTCCG CACTTCACCG GCAAGTACAC GGTCGAGCGC
ATGATCGAAA GCCTCGACAT CCCCGCGACT ATTCTGCGTC CCGCGTACTT TATGCAAAAC
GACCTCATGG TCCAGCAGAC GATCCAGAGC TACTCGGTGT ACCCAATGCC TATTGGCTCG
GCGGGCGTTT CAATGATTGA CGCGCGCGAT ATTGCCGATG TCGCCGTGGC AGAACTGTTG
CGACGCGACG AGGCATCTTC TGCTCTTGAT CTTGTAACGC TGGAGTTGGT GGGTCCACAA
GCGCTGACTG GTGCATCCGT GGCACAAACC TGGAGTTCCG CTCTGGATCG CGAGATCGCC
TACGGTGGCG ATGATGTAGC AGCCTTCGAA GGGCAATTGG CTTCTTACGG TCCTGGCTGG
CTGGCTTACG ACATGCGCTT GATGATGGCG GGCATCCAGA AGTTCGGCAT GCAAGCGGCT
GAAGGAGCCG TGGAACGGTT GGAAGCCATC ATTGGGCACC CGCTGCGCTC TTATGAAGGC
TTCGTCCGCG AAGCCACTGC CGGCGTCTAA
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| Protein sequence | MSILVTGATG TIGSLVTQGL ASAGADVKAM VRQPGKRDFP AGVTEVVADL TDVSSMRVAL
SSVRTLFLLN AVTPDEVTQA LIALNLAQEA GIERIVYLSV IHADTFTNVP HFTGKYTVER
MIESLDIPAT ILRPAYFMQN DLMVQQTIQS YSVYPMPIGS AGVSMIDARD IADVAVAELL
RRDEASSALD LVTLELVGPQ ALTGASVAQT WSSALDREIA YGGDDVAAFE GQLASYGPGW
LAYDMRLMMA GIQKFGMQAA EGAVERLEAI IGHPLRSYEG FVREATAGV
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