Gene PSPTO_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3016 
Symbol 
ID1184672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3391425 
End bp3391778 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content48% 
IMG OID637394376 
Producthypothetical protein 
Protein accessionNP_792811 
Protein GI28870192 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC AGCAATTTAT CGACTACGCA CAGAAAAAAT ACGACACGAA GCCGGATCAT 
CCGTGGGAAA AGTTTCCTGA TTACGCGGTC TTCAGGCATT CGGACAATGA CAAATGGTAT
GCCCTCCTCA TGGACATTCC TGCCGAAAAA ATAGGCATCA ATGGGGATAA GCGGGTTGAT
GTCATTGACT TGAAAGTTCA ACCAGAACTG GTGGGCTCCT TGAGGAAAAA GCCTGGCATT
TATCCGGCTT ATCACATGAA CAAGGAACAC TGGATCACCG TGCTGCTGAA CGGGCCGCTC
GGCGCAAAAG AAATCCATTC ACTGATTGAA GACAGTTTTC AGCTCACCCG CTGA
 
Protein sequence
MNRQQFIDYA QKKYDTKPDH PWEKFPDYAV FRHSDNDKWY ALLMDIPAEK IGINGDKRVD 
VIDLKVQPEL VGSLRKKPGI YPAYHMNKEH WITVLLNGPL GAKEIHSLIE DSFQLTR